RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CNOT8Q9UFF9 292 aaKnown RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 AGAP1Q9UPQ3 857 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 TRPA1O75762 1119 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RECQL4O94761 1208 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CLSTN1O94985 981 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 ASGR1P07306 291 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RRM1P23921 792 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 PAFAH1B1P43034 410 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 NSFP46459 744 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RAD23BP54727 409 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 VSNL1P62760 191 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 KCNA10Q16322 511 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 C2CD6Q53TS8 623 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 XKR4Q5GH76 650 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 LLGL2Q6P1M3 1020 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 WDR93Q6P2C0 686 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 APBB1IPQ7Z5R6 666 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 SERINC5Q86VE9 423 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 FAM228AQ86W67 206 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CPNE8Q86YQ8 564 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 KRT222Q8N1A0 295 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 ALG3Q92685 438 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 HPDLQ96IR7 371 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 BTBD6Q96KE9 485 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 TWNKQ96RR1 684 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 PCDHGC3Q9UN70 934 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 PIN4Q9Y237 131 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 NOC2LQ9Y3T9 749 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 TARSL2A2RTX5 802 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 MYBL1P10243 752 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 COMTP21964 271 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 MMP8P22894 467 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 BRD2P25440 801 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CDH5P33151 784 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 PEX5P50542 639 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 APLP1P51693 650 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 MRPS6P82932 125 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 RBP5P82980 135 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 SLC4A11Q8NBS3 891 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CD99L2Q8TCZ2 262 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 TRIM7Q9C029 511 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 CYP3A43Q9HB55 503 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 HMGXB4Q9UGU5 601 aa11.56□□□□□ -0.56
PFDN5-216ENST00000552341 TTC7AQ9ULT0 858 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-216ENST00000552341 PPEF2O14830 753 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 CILPO75339 1184 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 CHRNA1P02708 482 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 PAEPP09466 180 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 AKAP5P24588 427 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 YWHAEP62258 255 aaKnown RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 MGAT3Q09327 533 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 MESDQ14696 234 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 BRD3Q15059 726 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 PLEKHA7Q6IQ23 1121 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 CC2D1AQ6P1N0 951 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 ARRDC4Q8NCT1 418 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 HDAC7Q8WUI4 952 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 KRT35Q92764 455 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 TRIM11Q96F44 468 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.561e-23■■■□□ 18.7
PFDN5-216ENST00000552341 LRRC1Q9BTT6 524 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 CARD9Q9H257 536 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-216ENST00000552341 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 CDY2AQ9Y6F7 541 aa11.55□□□□□ -0.56
PFDN5-216ENST00000552341 TCRBV5S1A1TA0A578 114 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 CEP104O60308 925 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 SEC31AO94979 1220 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 LSM8O95777 96 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 HMGCRP04035 888 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 MARCKSL1P49006 195 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 MAMLD1Q13495 774 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 C11orf70Q9BRQ4 267 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 OSBPL7Q9BZF2 842 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 TRIM6Q9C030 488 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 ZNF518BQ9C0D4 1074 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 SENP6Q9GZR1 1112 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 ELOVL4Q9GZR5 314 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 FAM124BQ9H5Z6 455 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 ADAM22Q9P0K1 906 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 DMGDHQ9UI17 866 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 IPPQ9Y573 584 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 TRPV2Q9Y5S1 764 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms