RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SRFP11831 508 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 CPB1P15086 417 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 FCARP24071 287 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 EPHA5P54756 1037 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 ALCAMQ13740 583 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 POSTNQ15063 836 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 CCDC65Q8IXS2 484 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 C1orf127Q8N9H9 656 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 KCNG4Q8TDN1 519 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 GPR152Q8TDT2 470 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 NXPE3Q969Y0 559 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 PGLYRP2Q96PD5 576 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 PCIF1Q9H4Z3 704 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 KCNH3Q9ULD8 1083 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 YIPF1Q9Y548 306 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 ZFP37Q9Y6Q3 630 aaPredicted RBP14.1□□□□□ -0.15
NPAS3-209ENST00000551008 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
NPAS3-209ENST00000551008 USP34Q70CQ2 3546 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 FANCMQ8IYD8 2048 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 MTMR11A4FU01 709 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 TGFB1I1O43294 461 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
NPAS3-209ENST00000551008 EXTL3O43909 919 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 IL18RAPO95256 599 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 HSP90AA1P07900 732 aaKnown RBP14.09□□□□□ -0.15
NPAS3-209ENST00000551008 CDR1P51861 262 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ASIC1P78348 528 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 TWF1Q12792 350 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 GPR17Q13304 367 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 CUL4BQ13620 913 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ATL3Q6DD88 541 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
NPAS3-209ENST00000551008 OVOS1Q6IE37 1185 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 TMC8Q8IU68 726 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 SIX5Q8N196 739 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 IQUBQ8NA54 791 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ZNF507Q8TCN5 953 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 PLA2G2FQ9BZM2 168 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 GZF1Q9H116 711 aaPredicted RBP14.09□□□□□ -0.15
NPAS3-209ENST00000551008 BLZF1Q9H2G9 400 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 SLC2A4RGQ9NR83 387 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 SIX4Q9UIU6 781 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 MRPS23Q9Y3D9 190 aaKnown RBP14.09□□□□□ -0.15
NPAS3-209ENST00000551008 ANAPC1Q9H1A4 1944 aa14.09□□□□□ -0.15
NPAS3-209ENST00000551008 OR6C75A6NL08 312 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
NPAS3-209ENST00000551008 KLRC4O43908 158 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 SOAT2O75908 522 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 LRG1P02750 347 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 ODC1P11926 461 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 PDIA4P13667 645 aaKnown RBP14.08□□□□□ -0.16
NPAS3-209ENST00000551008 PTPN2P17706 415 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 ELF1P32519 619 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 ME1P48163 572 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 TAF6P49848 677 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 GPC5P78333 572 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 DUSP4Q13115 394 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 MYBPC2Q14324 1141 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 FAM26FQ5R3K3 315 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 WSCD1Q658N2 575 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 UNC13DQ70J99 1090 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 LRRTM3Q86VH5 581 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 NT5DC4Q86YG4 428 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 CBWD2Q8IUF1 395 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 SYCP3Q8IZU3 236 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 LEO1Q8WVC0 666 aaPredicted RBP14.08□□□□□ -0.16
NPAS3-209ENST00000551008 SCFD1Q8WVM8 642 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 MCRS1Q96EZ8 462 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 ZSWIM3Q96MP5 696 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 KXD1Q9BQD3 176 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 CORO1BQ9BR76 489 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 RBAKQ9NYW8 714 aaPredicted RBP14.08□□□□□ -0.16
NPAS3-209ENST00000551008 WNT16Q9UBV4 365 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 CA14Q9ULX7 337 aa14.08□□□□□ -0.16
NPAS3-209ENST00000551008 ZNF638Q14966 1978 aaKnown RBP14.07□□□□□ -0.16
NPAS3-209ENST00000551008 SHISA7A6NL88 538 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 CYB561D2O14569 222 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 ITGB3P05106 788 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 GJA1P17302 382 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 AOC1P19801 751 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
NPAS3-209ENST00000551008 CLCN5P51795 746 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 CCDC142Q17RM4 750 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 LMBRD2Q68DH5 695 aaPredicted RBP14.07□□□□□ -0.16
NPAS3-209ENST00000551008 ARMCX5Q6P1M9 558 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 FLCNQ8NFG4 579 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 PYM1Q9BRP8 204 aaKnown RBP14.07□□□□□ -0.16
NPAS3-209ENST00000551008 MTMR12Q9C0I1 747 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 ZCWPW1Q9H0M4 648 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms