RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LONP2Q86WA8 852 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 RALGPS2Q86X27 583 aaPredicted RBP10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 TMC8Q8IU68 726 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 YAF2Q8IY57 180 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 SYNPOQ8N3V7 929 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 KCNN1Q92952 543 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 RSPRY1Q96DX4 576 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 SEMA4GQ9NTN9 838 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 OBP2AQ9NY56 170 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 HSFX1Q9UBD0 423 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 NCANO14594 1321 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 ACACBO00763 2458 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 OR6C75A6NL08 312 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 SFI1A8K8P3 1242 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CHURC1-FNTBB4DL54 471 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 SLC16A4O15374 487 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CLDN3O15551 220 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 FGF19O95750 216 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 ADRB2P07550 413 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CLTAP09496 248 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CPB1P15086 417 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 PAX3P23760 479 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 PRPHP41219 470 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 ALDH1A3P47895 512 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 FNTBP49356 437 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 TOB1P50616 345 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 KPNA1P52294 538 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 SMTNP53814 917 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 DMWDQ09019 674 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 STRN3Q13033 797 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 MYBPC2Q14324 1141 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 LPAL2Q16609 132 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 KYAT1Q16773 422 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 ARHGAP29Q52LW3 1261 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 PPM1JQ5JR12 505 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 KRT79Q5XKE5 535 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 PRR23CQ6ZRP0 262 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 PRR23BQ6ZRT6 265 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 DNAJB7Q7Z6W7 309 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 TMEM161BQ8NDZ6 487 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 DDX1Q92499 740 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 LRRC3BQ96PB8 259 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 MMTAG2Q9BU76 263 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 DNAJC25Q9H1X3 360 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 NOL7Q9UMY1 257 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 YIPF1Q9Y548 306 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
TRAFD1-207ENST00000550051 CCDC163A0A0D9SF12 145 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 A0A1W2PRU2 124 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 SPECC1L-ADORA2AF8WAN1 911 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 MAPTP10636 758 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 PLS3P13797 630 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 TYMPP19971 482 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 CTHP32929 405 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 CCINQ13939 588 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 IL17AQ16552 155 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 SEZ6Q53EL9 994 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 HYIQ5T013 277 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 GAREM2Q75VX8 874 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 KCNK18Q7Z418 384 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 USP37Q86T82 979 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 SYT2Q8N9I0 419 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 PSMG2Q969U7 264 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 LOXL4Q96JB6 756 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 HAPLN2Q9GZV7 340 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 SLITRK6Q9H5Y7 841 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 TUBGCP4Q9UGJ1 667 aa10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 NUP210Q8TEM1 1887 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-207ENST00000550051 SLC38A8A6NNN8 435 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 TM4SF5O14894 197 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 XPOTO43592 962 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 HARSP12081 509 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 SCP2P22307 547 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 CDC25AP30304 524 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 LIMK1P53667 647 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 LILRA4P59901 499 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 HMGN5P82970 282 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 SRSF5Q13243 272 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 NBR1Q14596 966 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 GREB1Q4ZG55 1949 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 OVOS1Q6IE37 1185 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 TXNDC11Q6PKC3 985 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 DTHD1Q6ZMT9 781 aa10.71□□□□□ -0.69
TRAFD1-207ENST00000550051 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms