RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ERVK-5Q9HDB9 667 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 PARP2Q9UGN5 583 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 STRIP2Q9ULQ0 834 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 NR2E1Q9Y466 385 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 A0A087WZ62 844 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 HOXA11P31270 313 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 USP8P40818 1118 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 RAD23BP54727 409 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 IRX5P78411 483 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 GPR162Q16538 588 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 SND1Q7KZF4 910 aaKnown RBP eCLIP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 LRRC52Q8N7C0 313 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM35BQ8NCS4 154 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 FDXACB1Q9BRP7 624 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 GRHL1Q9NZI5 618 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 ADAM21Q9UKJ8 722 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 GOLGA6BA6NDN3 693 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 HMGCRP04035 888 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 RPLP2P05387 115 aaKnown RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 SLC10A3P09131 477 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 NUDT17P0C025 328 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 FAM153BP0C7A2 387 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 COILP38432 576 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 MARCKSL1P49006 195 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 DR1Q01658 176 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 PPFIA1Q13136 1202 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 STILQ15468 1287 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF699Q32M78 642 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 FAM153CQ494X1 144 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 NAA35Q5VZE5 725 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 LMBRD2Q68DH5 695 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ZDHHC24Q6UX98 284 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ARCQ7LC44 396 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 RHOT1Q8IXI2 618 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ST7Q9NRC1 585 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 FAM153AQ9UHL3 310 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 MTUS1Q9ULD2 1270 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 NFU1Q9UMS0 254 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 UTP11Q9Y3A2 253 aaKnown RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 PHACTR2O75167 634 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ZMYND10O75800 440 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CFHP08603 1231 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CYP3A5P20815 502 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 SCNN1AP37088 669 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 GGCXP38435 758 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 PIGHQ14442 188 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF268Q14587 947 aaPredicted RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 MESDQ14696 234 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CNGA2Q16280 664 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CCDC142Q17RM4 750 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 PKDCCQ504Y2 493 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 RHBDF2Q6PJF5 856 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ART4Q93070 314 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 MCRS1Q96EZ8 462 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 SNX27Q96L92 541 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 DDX47Q9H0S4 455 aaKnown RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CYLDQ9NQC7 956 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 SEPT11Q9NVA2 429 aaKnown RBP10.61□□□□□ -0.71
RAB5B-206ENST00000549505 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 WHRNQ9P202 907 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 RASAL2Q9UJF2 1139 aa10.61□□□□□ -0.71
RAB5B-206ENST00000549505 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SIGLEC16A6NMB1 481 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 CELF2O95319 508 aaKnown RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 RARAP10276 462 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 KCNE1P15382 129 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF252P-AS1Q0IIN9 211 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 PTK6Q13882 451 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 JADE1Q6IE81 842 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TTC27Q6P3X3 843 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TMC3Q7Z5M5 1100 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 DPP9Q86TI2 863 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 JAMLQ86YT9 394 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SLC4A11Q8NBS3 891 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 AP1M1Q9BXS5 423 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SDCBP2Q9H190 292 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF487B1APH4 448 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 INO80B-WBP1J3KQ70 363 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 MYO1FO00160 1098 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TP73O15350 636 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 NFICP08651 508 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 CXCL8P10145 99 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 VDRP11473 427 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 P4HA1P13674 534 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TM4SF4P48230 202 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 RBP5P82980 135 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TRPC3Q13507 836 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 UAP1Q16222 522 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 CCNG2Q16589 344 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SESTD1Q86VW0 696 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms