RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 CEP135Q66GS9 1140 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
SP1-203ENST00000548560 ZNF280DQ6N043 979 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.9
SP1-203ENST00000548560 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 SMYD4Q8IYR2 804 aaPredicted RBP9.4□□□□□ -0.9
SP1-203ENST00000548560 ERCC4Q92889 916 aaPredicted RBP9.4□□□□□ -0.9
SP1-203ENST00000548560 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 KCTD10Q9H3F6 313 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 RXFP1Q9HBX9 757 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 ITGA11Q9UKX5 1188 aa9.4□□□□□ -0.9
SP1-203ENST00000548560 DENND4AQ7Z401 1863 aa9.4□□□□□ -0.91
SP1-203ENST00000548560 PSMA7O14818 248 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 KRT13P13646 458 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 EPCAMP16422 314 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 LTBRP36941 435 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 KCNQ1P51787 676 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 CLCN4P51793 760 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 YWHAHQ04917 246 aaPredicted RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 PSMD6Q15008 389 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 NFIL3Q16649 462 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 LMBRD2Q68DH5 695 aaPredicted RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 CES5AQ6NT32 575 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 ANKRD54Q6NXT1 300 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 TMEM184AQ6ZMB5 413 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 SLC9A9Q8IVB4 645 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 VN1R2Q8NFZ6 395 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 SPATA20Q8TB22 786 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 LNX1Q8TBB1 728 aaPredicted RBP9.39□□□□□ -0.91
SP1-203ENST00000548560 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 CGRRF1Q99675 332 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 SFXN1Q9H9B4 322 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 RABGEF1Q9UJ41 708 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 DSEQ9UL01 958 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 MYH10P35580 1976 aa9.39□□□□□ -0.91
SP1-203ENST00000548560 ANO9A1A5B4 782 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 M0QZQ0 153 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 PIRO00625 290 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 PPEF2O14830 753 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 EPB41P11171 864 aaKnown RBP9.38□□□□□ -0.91
SP1-203ENST00000548560 CPB1P15086 417 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 TYMPP19971 482 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 OR1D2P34982 312 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 PRCPP42785 496 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 AARSP49588 968 aaKnown RBP eCLIP9.38□□□□□ -0.91
SP1-203ENST00000548560 AP3M2P53677 418 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 WNT7BP56706 349 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 LILRA4P59901 499 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 RBP5P82980 135 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 RBM10P98175 930 aaKnown RBP9.38□□□□□ -0.91
SP1-203ENST00000548560 GUCA2AQ02747 115 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 ITIH3Q06033 890 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 BFSP1Q12934 665 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 MYO1EQ12965 1108 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 KCNC3Q14003 757 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CAMK4Q16566 473 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 EDRF1Q3B7T1 1238 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CTXN3Q4LDR2 81 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 COBLL1Q53SF7 1204 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 LIN9Q5TKA1 542 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 ISM2Q6H9L7 571 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 OVOS1Q6IE37 1185 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CD300LGQ6UXG3 332 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 METTL23Q86XA0 190 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 PALB2Q86YC2 1186 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 LRRC52Q8N7C0 313 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 C1orf127Q8N9H9 656 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 TRIML1Q8N9V2 468 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 SMRP1Q8NCR6 262 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.38□□□□□ -0.91
SP1-203ENST00000548560 SLC22A17Q8WUG5 538 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 TMEM174Q8WUU8 243 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 MSLNLQ96KJ4 702 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
SP1-203ENST00000548560 NUP62CLQ9H1M0 184 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 PLEKHA4Q9H4M7 779 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CLEC1BQ9P126 229 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 CDY1Q9Y6F8 540 aa9.38□□□□□ -0.91
SP1-203ENST00000548560 BICDL2A1A5D9 508 aa9.37□□□□□ -0.91
SP1-203ENST00000548560 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
SP1-203ENST00000548560 KPNA7A9QM74 516 aa9.37□□□□□ -0.91
SP1-203ENST00000548560 BIN1O00499 593 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms