RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KRT72Q14CN4 511 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 CRB2Q5IJ48 1285 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 DGKKQ5KSL6 1271 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 FAM102AQ5T9C2 384 aaPredicted RBP5.03□□□□□ -1.6
PTCH1-216ENST00000548379 ZNF783Q6ZMS7 281 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 SPOCD1Q6ZMY3 1216 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 PPP1R32Q7Z5V6 425 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 Q8TCH9 128 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 NUP133Q8WUM0 1156 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 WWC2-AS2Q96NR7 200 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 PSMD1Q99460 953 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 NEU1Q99519 415 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 ARPC5LQ9BPX5 153 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 TINAGL1Q9GZM7 467 aaPredicted RBP5.03□□□□□ -1.6
PTCH1-216ENST00000548379 ZCCHC4Q9H5U6 513 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 DMTF1Q9Y222 760 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 DAAM1Q9Y4D1 1078 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 PAXBP1Q9Y5B6 917 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTCH1-216ENST00000548379 GRIN2BQ13224 1484 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 MAGI1Q96QZ7 1491 aaPredicted RBP5.02□□□□□ -1.61
PTCH1-216ENST00000548379 LOC102724159A0A0B4J2E5 919 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF785A8K8V0 405 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 GRXCR1A8MXD5 290 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 ITGB3P05106 788 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 ITGB1P05556 798 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SETSIPP0DME0 302 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 COMTP21964 271 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 CHN2P52757 468 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 PSMC1P62191 440 aaKnown RBP5.02□□□□□ -1.61
PTCH1-216ENST00000548379 BTKQ06187 659 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 CTBP1Q13363 440 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 PWP2Q15269 919 aaKnown RBP5.02□□□□□ -1.61
PTCH1-216ENST00000548379 NOMO2Q5JPE7 1267 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 C3orf38Q5JPI3 329 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
PTCH1-216ENST00000548379 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 IZUMO3Q5VZ72 239 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 GLB1LQ6UWU2 654 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 MED25Q71SY5 747 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 USP37Q86T82 979 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF808Q8N4W9 903 aaPredicted RBP5.02□□□□□ -1.61
PTCH1-216ENST00000548379 AOPEPQ8N6M6 819 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 BRI3BPQ8WY22 251 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 BRIP1Q9BX63 1249 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF518BQ9C0D4 1074 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 CD248Q9HCU0 757 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SLAMF7Q9NQ25 335 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 PLCB1Q9NQ66 1216 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SRRDQ9UH36 339 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 PLEKHM1Q9Y4G2 1056 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SNX13Q9Y5W8 968 aa5.02□□□□□ -1.61
PTCH1-216ENST00000548379 SYNJ2O15056 1496 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 GAPVD1Q14C86 1478 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 SYNJ1O43426 1573 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 A0A1W2PPC4 97 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 POM121BA6NF01 834 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 LEFTY2O00292 366 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 NCK2O43639 380 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF623O75123 536 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 FGF18O76093 207 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 UNC5CO95185 931 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 PIM1P11309 404 aaPredicted RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 CKBP12277 381 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 HK1P19367 917 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 STT3AP46977 705 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 KCNJ5P48544 419 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 SLC11A2P49281 568 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF135P52742 658 aaPredicted RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 POU6F2P78424 691 aaPredicted RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 SLC13A2Q13183 592 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 RHOT2Q8IXI1 618 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 EXOC8Q8IYI6 725 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 MB21D1Q8N884 522 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 PDPRQ8NCN5 879 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 TBC1D15Q8TC07 691 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 ATXN2LQ8WWM7 1075 aaKnown RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 EDAQ92838 391 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 MNTQ99583 582 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 SPATA5L1Q9BVQ7 753 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 PNPLA8Q9NP80 782 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 TRMT13Q9NUP7 481 aaKnown RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 VSX1Q9NZR4 365 aaPredicted RBP5.01□□□□□ -1.61
PTCH1-216ENST00000548379 POGKQ9P215 609 aa5.01□□□□□ -1.61
PTCH1-216ENST00000548379 A0A0G2JLL6 359 aaPredicted RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 MBD3L4A6NDZ8 208 aaPredicted RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 MBD3L3A6NE82 208 aaPredicted RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 CAPN14A8MX76 684 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 TBC1D4O60343 1298 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 GNAI2P04899 355 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 FCER1AP12319 257 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 IL1R1P14778 569 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 TOB1P50616 345 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms