RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 TRAK2O60296 914 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 LILRB5O75023 590 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 TBCAO75347 108 aaKnown RBP25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 PIGRP01833 764 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 GJA1P17302 382 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 TNFSF9P41273 254 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 VIPR2P41587 438 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 MCM2P49736 904 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 ARHGAP15Q53QZ3 475 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 ARSHQ5FYA8 562 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 SPATA1Q5VX52 437 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 POTEHQ6S545 545 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 NELL1Q92832 810 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 REEP2Q9BRK0 252 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 EPC1Q9H2F5 836 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 HSFX1Q9UBD0 423 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 GMEB2Q9UKD1 530 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 SMC3Q9UQE7 1217 aa25.04■■□□□ 1.6
SMARCD1-204ENST00000547637 A0A1W2PRU2 124 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 CHADO15335 359 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 MOSPD3O75425 235 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 TUFMP49411 452 aaKnown RBP25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 FZD5Q13467 585 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 TSSK4Q6SA08 328 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 METTL23Q86XA0 190 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 FAM200AQ8TCP9 573 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 TMX3Q96JJ7 454 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 C8orf33Q9H7E9 229 aaPredicted RBP25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 DSEQ9UL01 958 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 SMG5Q9UPR3 1016 aaKnown RBP25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 DERAQ9Y315 318 aa25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.03■■□□□ 1.6
SMARCD1-204ENST00000547637 PRR5-ARHGAP8B1AHC4 643 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 OR4Q2P0C623 313 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 LONP1P36776 959 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 KPNA1P52294 538 aaPredicted RBP25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 LILRA4P59901 499 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 ARHGAP8P85298 464 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 LRRC32Q14392 662 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 VEPH1Q14D04 833 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 ENOX2Q16206 610 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 SLFN12LQ6IEE8 588 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 CENPPQ6IPU0 288 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 SHKBP1Q8TBC3 707 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 SENP8Q96LD8 212 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 HAPLN2Q9GZV7 340 aa25.02■■□□□ 1.6
SMARCD1-204ENST00000547637 COL4A3Q01955 1670 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 A0A0B4J269 797 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 ADRB2P07550 413 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 CCNE1P24864 410 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 CXCL12P48061 93 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 TAF12Q16514 161 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 LARP1BQ659C4 914 aaKnown RBP25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 THEM5Q8N1Q8 247 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 CELF5Q8N6W0 485 aaKnown RBP25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 GCNAQ96QF7 691 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 ATXN3LQ9H3M9 355 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 ASB7Q9H672 318 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 DLL3Q9NYJ7 618 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 SLC27A5Q9Y2P5 690 aa25.01■■□□□ 1.59
SMARCD1-204ENST00000547637 MTMR11A4FU01 709 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 ZNF131P52739 623 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 SMARCB1Q12824 385 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 TMEM132DQ14C87 1099 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 RSPO4Q2I0M5 234 aaPredicted RBP25■■□□□ 1.59
SMARCD1-204ENST00000547637 C8orf34Q49A92 452 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 JADE1Q6IE81 842 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 DNAJB7Q7Z6W7 309 aaPredicted RBP25■■□□□ 1.59
SMARCD1-204ENST00000547637 KRI1Q8N9T8 703 aaKnown RBP25■■□□□ 1.59
SMARCD1-204ENST00000547637 PSMG2Q969U7 264 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 CPSF3Q9UKF6 684 aaKnown RBP25■■□□□ 1.59
SMARCD1-204ENST00000547637 ZNF292O60281 2723 aa25■■□□□ 1.59
SMARCD1-204ENST00000547637 GTF2BQ00403 316 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 LMNB2Q03252 620 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 ARHGAP29Q52LW3 1261 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 C9orf57Q5W0N0 161 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 ADALQ6DHV7 355 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 BRAPQ7Z569 592 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 ARID3BQ8IVW6 561 aaPredicted RBP24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 ATAD1Q8NBU5 361 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 RAD54LQ92698 747 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 LRRC3Q9BY71 257 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 OBP2AQ9NY56 170 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 USP18Q9UMW8 372 aa24.99■■□□□ 1.59
SMARCD1-204ENST00000547637 TICRRQ7Z2Z1 1910 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 SHISA7A6NL88 538 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 GUCY2FP51841 1108 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 POU5F1Q01860 360 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 FCHO2Q0JRZ9 810 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 MCM6Q14566 821 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 PTPAQ15257 358 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 DGKKQ5KSL6 1271 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 TMC8Q8IU68 726 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 ZNF687Q8N1G0 1237 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 C2orf15Q8WU43 125 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 DNAJC25Q9H1X3 360 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 THG1LQ9NWX6 298 aaKnown RBP24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 ZMYM5Q9UJ78 669 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 C2CD2Q9Y426 696 aa24.98■■□□□ 1.59
SMARCD1-204ENST00000547637 PIRO00625 290 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms