RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 MAP2K6P52564 334 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
CPNE8-204ENST00000546603 PREPLQ4J6C6 727 aaPredicted RBP7.32□□□□□ -1.24
CPNE8-204ENST00000546603 PRR16Q569H4 304 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 TRIB1Q96RU8 372 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 CRAMP1Q96RY5 1269 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 SYNPO2LQ9H987 977 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 GPR35Q9HC97 309 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 LRIT1Q9P2V4 623 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 ZDHHC8Q9ULC8 765 aa7.32□□□□□ -1.24
CPNE8-204ENST00000546603 ZNF785A8K8V0 405 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 OVOL3O00110 214 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 POLRMTO00411 1230 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 TOR1BO14657 336 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 KIAA0355O15063 1070 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 PEX1O43933 1283 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 PSMC1P62191 440 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 MRPS35P82673 323 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 MCL1Q07820 350 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 HLXQ14774 488 aaPredicted RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 KIF22Q14807 665 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 ZNF169Q14929 603 aaPredicted RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 SF3B3Q15393 1217 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 CCDC157Q569K6 752 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 STRIP1Q5VSL9 837 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 TAPT1Q6NXT6 567 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 MICALCLQ6ZW33 695 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 NSUN7Q8NE18 718 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 SNX19Q92543 992 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 HPS3Q969F9 1004 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 MAP3K14Q99558 947 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 MRPL46Q9H2W6 279 aaKnown RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 SLAMF7Q9NQ25 335 aa7.31□□□□□ -1.24
CPNE8-204ENST00000546603 PNMA8BQ9ULN7 279 aaPredicted RBP7.31□□□□□ -1.24
CPNE8-204ENST00000546603 PRSS29PA6NIE9 313 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 E9PLN8 166 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 OFD1O75665 1012 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 RARBP10826 455 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 TYRP14679 529 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 PLA2G5P39877 138 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 PIN1Q13526 163 aaPredicted RBP7.3□□□□□ -1.24
CPNE8-204ENST00000546603 HABP2Q14520 560 aaPredicted RBP7.3□□□□□ -1.24
CPNE8-204ENST00000546603 CD300EQ496F6 205 aaPredicted RBP7.3□□□□□ -1.24
CPNE8-204ENST00000546603 ATAT1Q5SQI0 421 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 ADGRG5Q8IZF4 528 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 CAGE1Q8TC20 777 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 TNPO1Q92973 898 aaKnown RBP7.3□□□□□ -1.24
CPNE8-204ENST00000546603 VKORC1Q9BQB6 163 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 CNPPD1Q9BV87 410 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 PNPOQ9NVS9 261 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 INSL6Q9Y581 213 aa7.3□□□□□ -1.24
CPNE8-204ENST00000546603 SALL3Q9BXA9 1300 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 YY2O15391 372 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 GATA3P23771 443 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 FOLR3P41439 243 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 ZNF135P52742 658 aaPredicted RBP7.29□□□□□ -1.24
CPNE8-204ENST00000546603 EPHB1P54762 984 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 VWA1Q6PCB0 445 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 TMPRSS9Q7Z410 1059 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 SH2D3CQ8N5H7 860 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 POC1BQ8TC44 478 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 DDX17Q92841 729 aaKnown RBP7.29□□□□□ -1.24
CPNE8-204ENST00000546603 C1GALT1C1Q96EU7 318 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 CDK5RAP3Q96JB5 506 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 CAMKK2Q96RR4 588 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 RHOBTB2Q9BYZ6 727 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 ZNF180Q9UJW8 692 aa7.29□□□□□ -1.24
CPNE8-204ENST00000546603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPNE8-204ENST00000546603 SPATA31A3Q5VYP0 1347 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 PROM1O43490 865 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 AKAP10O43572 662 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 MATN4O95460 622 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 GNAI2P04899 355 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 LPOP22079 712 aaPredicted RBP7.28□□□□□ -1.24
CPNE8-204ENST00000546603 IL12RB1P42701 662 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 PHKA1P46020 1223 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 RARRES1P49788 294 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 RAB27AP51159 221 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 IFIT1BQ5T764 474 aaKnown RBP7.28□□□□□ -1.24
CPNE8-204ENST00000546603 GRAMD1CQ8IYS0 662 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 SIMC1Q8NDZ2 872 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 ACTRT2Q8TDY3 377 aa7.28□□□□□ -1.24
CPNE8-204ENST00000546603 JPH3Q8WXH2 748 aaPredicted RBP7.28□□□□□ -1.24
CPNE8-204ENST00000546603 H3BUI4 141 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 MPPED1O15442 326 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 SOAT2O75908 522 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 MC2RQ01718 297 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 SLC30A5Q8TAD4 765 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 MTFMTQ96DP5 389 aaKnown RBP7.27□□□□□ -1.25
CPNE8-204ENST00000546603 PGBD1Q96JS3 809 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 DUSP26Q9BV47 211 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 FOXJ2Q9P0K8 574 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 TLK1Q9UKI8 766 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 PCDHA1Q9Y5I3 950 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 NR2E3Q9Y5X4 410 aa7.27□□□□□ -1.25
CPNE8-204ENST00000546603 NPTX2P47972 431 aa7.26□□□□□ -1.25
CPNE8-204ENST00000546603 CLK3P49761 638 aaKnown RBP7.26□□□□□ -1.25
CPNE8-204ENST00000546603 NKX6-1P78426 367 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms