RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 RNF14Q9UBS8 474 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 CHORDC1Q9UHD1 332 aaPredicted RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 AMFRQ9UKV5 643 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 MYBL1P10243 752 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 BRD2P25440 801 aaKnown RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 NSFP46459 744 aaKnown RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 XKR4Q5GH76 650 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 CCDC181Q5TID7 509 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 PASD1Q8IV76 773 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 MSANTD4Q8NCY6 345 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 APOL6Q9BWW8 343 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 CYP3A43Q9HB55 503 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 CNOT8Q9UFF9 292 aaKnown RBP16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 TUBGCP4Q9UGJ1 667 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
CACNA2D4-217ENST00000545595 KCNK3O14649 394 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 CHRNA1P02708 482 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 P4HA1P13674 534 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 AKAP5P24588 427 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 PAFAH1B1P43034 410 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 CDH8P55286 799 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 C2orf54Q08AI8 447 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 ITGA7Q13683 1181 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 CFAP221Q4G0U5 840 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 PPP1R2P3Q6NXS1 205 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 PHF13Q86YI8 300 aaPredicted RBP16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 SMG8Q8ND04 991 aaKnown RBP16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 TFAP2BQ92481 460 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 MS4A14Q96JA4 679 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 PBKQ96KB5 322 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 IPPQ9Y573 584 aa16.73■□□□□ 0.27
CACNA2D4-217ENST00000545595 CILPO75339 1184 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 LSM8O95777 96 aaKnown RBP16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 PAEPP09466 180 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 CTSHP09668 335 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 RAD23BP54727 409 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 GLRA4Q5JXX5 417 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 SLC43A3Q8NBI5 491 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 SPATA4Q8NEY3 305 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 BEST2Q8NFU1 509 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 C18orf25Q96B23 403 aaPredicted RBP16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 GLT1D1Q96MS3 346 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 PARD6BQ9BYG5 372 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 FAM124BQ9H5Z6 455 aaPredicted RBP16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 HMGXB4Q9UGU5 601 aa16.72■□□□□ 0.27
CACNA2D4-217ENST00000545595 PPEF2O14830 753 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 RHOXF2BP0C7M4 288 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 KCNE1P15382 129 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 RRM1P23921 792 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 CDH5P33151 784 aaPredicted RBP16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 INCA1Q0VD86 236 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 PTGISQ16647 500 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 MMGT1Q8N4V1 131 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 VCPIP1Q96JH7 1222 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 TWNKQ96RR1 684 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 RHOXF2Q9BQY4 288 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 C11orf70Q9BRQ4 267 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■□□□ 13.5
CACNA2D4-217ENST00000545595 UBQLN1Q9UMX0 589 aaKnown RBP16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 ALG6Q9Y672 507 aa16.71■□□□□ 0.27
CACNA2D4-217ENST00000545595 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 RPS6KA5O75582 802 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 TNNC1P63316 161 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 MYO1EQ12965 1108 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 PTK7Q13308 1070 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 PNKPQ96T60 521 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 KLK14Q9P0G3 267 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 RAB21Q9UL25 225 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 TMEM110-MUSTN1A8MSY1 372 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 CAND2O75155 1236 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 MMP8P22894 467 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 CLCN6P51797 869 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 MESDQ14696 234 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 C2CD6Q53TS8 623 aa16.7■□□□□ 0.26
CACNA2D4-217ENST00000545595 LIN9Q5TKA1 542 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms