RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MAP3K6O95382 1288 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 URODP06132 367 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 SYT1P21579 422 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 AKAP5P24588 427 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 TARSP26639 723 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 CA8P35219 290 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 LONP1P36776 959 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 UBA7P41226 1012 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 MAP2K3P46734 347 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 PEX3P56589 373 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 RESTQ13127 1097 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 TUSC3Q13454 348 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 CBX2Q14781 532 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 ZRSR1Q15695 479 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 ATF7IP2Q5U623 682 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 SYCE2Q6PIF2 218 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 CABP7Q86V35 215 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 PPFIBP1Q86W92 1011 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 GPR65Q8IYL9 337 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 KCNN1Q92952 543 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 SNX21Q969T3 373 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 CALML4Q96GE6 196 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 EMILIN2Q9BXX0 1053 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 MRPL4Q9BYD3 311 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 KMT5AQ9NQR1 393 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 MRPL17Q9NRX2 175 aaKnown RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 FOXD3Q9UJU5 478 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 ODF2LQ9ULJ1 636 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 SSX2IPQ9Y2D8 614 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 PRG3Q9Y2Y8 225 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 MORC2Q9Y6X9 1032 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 NOTCH4Q99466 2003 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 SF3B1O75533 1304 aaKnown RBP eCLIP8.41□□□□□ -1.062e-7■■■■■ 35.3
SNHG1-223ENST00000545440 H0YCG3 227 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PTGESO14684 152 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 CXCL14O95715 111 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 SSBP05455 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PLA2G4BP0C869 781 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 ALADP13716 330 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PLS3P13797 630 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 LIG1P18858 919 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 SCP2P22307 547 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PROZP22891 400 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 OR1G1P47890 313 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 GLUD2P49448 558 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 ITIH3Q06033 890 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PTPAQ15257 358 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF568Q3ZCX4 644 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 NT5DC1Q5TFE4 455 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 EEF1DP3Q658K8 133 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 FUT10Q6P4F1 479 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM87AQ8NBN3 555 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 AUTS2Q8WXX7 1259 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 NECTIN4Q96NY8 510 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
SNHG1-223ENST00000545440 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
SNHG1-223ENST00000545440 COLEC11Q9BWP8 271 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PHF7Q9BWX1 381 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-223ENST00000545440 CCSER1Q9C0I3 900 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 S1PR5Q9H228 398 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 EPHX3Q9H6B9 360 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 SFXN1Q9H9B4 322 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 PTPRHQ9HD43 1115 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 AVENQ9NQS1 362 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-223ENST00000545440 MIOSQ9NXC5 875 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 SNTG2Q9NY99 539 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 ADAM28Q9UKQ2 775 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 DENND4CQ5VZ89 1909 aa8.41□□□□□ -1.06
SNHG1-223ENST00000545440 LOC730098B7Z3J9 87 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ABLIM1O14639 778 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 SLC16A4O15374 487 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 DCXO43602 365 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 STX6O43752 255 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 C1RP00736 705 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 GHRHP01286 108 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 THP07101 528 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CNPP09543 421 aaKnown RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 PLCG1P19174 1290 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 SOX18P35713 384 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CLCN4P51793 760 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF131P52739 623 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 DSG1Q02413 1049 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CREMQ03060 361 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 GRIN1Q05586 938 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 STRN3Q13033 797 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-223ENST00000545440 NAB2Q15742 525 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 KIAA1841Q6NSI8 718 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 CES5AQ6NT32 575 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 MPZL3Q6UWV2 235 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 ZPBP2Q6X784 338 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 C1orf127Q8N9H9 656 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM161BQ8NDZ6 487 aa8.4□□□□□ -1.06
SNHG1-223ENST00000545440 OR13H1Q8NG92 308 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms