RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 K7ENM7 598 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 HNRNPDLO14979 420 aaKnown RBP17.63■□□□□ 0.41
DDX55-212ENST00000544738 PIGRP01833 764 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
DDX55-212ENST00000544738 PTPAQ15257 358 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 SEZ6Q53EL9 994 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 SLC8B1Q6J4K2 584 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 CEP68Q76N32 757 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 ZNF461Q8TAF7 563 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 DNASE1L2Q92874 299 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
DDX55-212ENST00000544738 ELSPBP1Q96BH3 223 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 TSPAN18Q96SJ8 248 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 STK17AQ9UEE5 414 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
DDX55-212ENST00000544738 SPEGQ15772 3267 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 TTC26A0AVF1 554 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 AXIN1O15169 862 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 OGTO15294 1046 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 XPOTO43592 962 aaKnown RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 RHOP08100 348 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 TXLNAP40222 546 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 SF3A2Q15428 464 aaKnown RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 CCDC6Q16204 474 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 SLC5A9Q2M3M2 681 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 POTEHQ6S545 545 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 LRRC15Q8TF66 581 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 IER2Q9BTL4 223 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 TRMT61BQ9BVS5 477 aaKnown RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 ZSCAN16Q9H4T2 348 aaPredicted RBP17.62■□□□□ 0.41
DDX55-212ENST00000544738 ZMIZ1Q9ULJ6 1067 aa17.62■□□□□ 0.41
DDX55-212ENST00000544738 MEFVO15553 781 aaPredicted RBP17.61■□□□□ 0.41
DDX55-212ENST00000544738 CXCL8P10145 99 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 CEBPBP17676 345 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 CYP3A5P20815 502 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 MARCKSP29966 332 aaPredicted RBP17.61■□□□□ 0.41
DDX55-212ENST00000544738 ELF1P32519 619 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 MCM4P33991 863 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 CNR2P34972 360 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 GTF2BQ00403 316 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 RESTQ13127 1097 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 FAM160A2Q8N612 972 aaPredicted RBP17.61■□□□□ 0.41
DDX55-212ENST00000544738 HAPLN2Q9GZV7 340 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 ZFP14Q9HCL3 533 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
DDX55-212ENST00000544738 UBQLN1Q9UMX0 589 aaKnown RBP17.61■□□□□ 0.41
DDX55-212ENST00000544738 PIAS3Q9Y6X2 628 aa17.61■□□□□ 0.41
DDX55-212ENST00000544738 A0A0B4J269 797 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 C1QTNF9BB2RNN3 333 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
DDX55-212ENST00000544738 TM4SF5O14894 197 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 ABLIM3O94929 683 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 C1QTNF9P0C862 333 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 LRPAP1P30533 357 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 GDI1P31150 447 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 ROR1Q01973 937 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 MRPL58Q14197 206 aaKnown RBP17.6■□□□□ 0.41
DDX55-212ENST00000544738 ZBTB6Q15916 424 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 LONP2Q86WA8 852 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 MAP4K3Q8IVH8 894 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 CD302Q8IX05 232 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 IRF7Q92985 503 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 KIF12Q96FN5 646 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 MSTO1Q9BUK6 570 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 ARRDC1-AS1Q9H2J1 176 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 RPF1Q9H9Y2 349 aaKnown RBP17.6■□□□□ 0.41
DDX55-212ENST00000544738 RXFP3Q9NSD7 469 aa17.6■□□□□ 0.41
DDX55-212ENST00000544738 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
DDX55-212ENST00000544738 CHRNB1P11230 501 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 ATF2P15336 505 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 PTPN2P17706 415 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 CCNE1P24864 410 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 TNFSF9P41273 254 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 LIMK1P53667 647 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 GAS6Q14393 721 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 CTXN3Q4LDR2 81 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 FAM78AQ5JUQ0 283 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 RRAGBQ5VZM2 374 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 SLFN12LQ6IEE8 588 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 ZNF280DQ6N043 979 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 SPEM1Q8N4L4 309 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 FIZ1Q96SL8 496 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 OXCT2Q9BYC2 517 aaPredicted RBP17.59■□□□□ 0.41
DDX55-212ENST00000544738 ZNF334Q9HCZ1 680 aaPredicted RBP17.59■□□□□ 0.41
DDX55-212ENST00000544738 SEL1LQ9UBV2 794 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 TUBGCP4Q9UGJ1 667 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 FBXL5Q9UKA1 691 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 MAFFQ9ULX9 164 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 PCDHB8Q9UN66 801 aa17.59■□□□□ 0.41
DDX55-212ENST00000544738 NOTCH4Q99466 2003 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms