RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TIMM13Q9Y5L4 95 aaPredicted RBP20.6■□□□□ 0.89
DDX55-211ENST00000544429 CDY1Q9Y6F8 540 aa20.6■□□□□ 0.89
DDX55-211ENST00000544429 ARHGEF37A1IGU5 675 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 GRXCR2A6NFK2 248 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 H7C4K7 107 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 CYB561D2O14569 222 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 SLC16A3O15427 465 aaKnown RBP20.59■□□□□ 0.89
DDX55-211ENST00000544429 ABLIM3O94929 683 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 MBD3O95983 291 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 ROR1Q01973 937 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 SMAD4Q13485 552 aaKnown RBP20.59■□□□□ 0.89
DDX55-211ENST00000544429 PUS10Q3MIT2 529 aaKnown RBP20.59■□□□□ 0.89
DDX55-211ENST00000544429 ZNF280DQ6N043 979 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 NELFBQ8WX92 580 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 SUSD6Q92537 303 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 RTP3Q9BQQ7 232 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 PLEKHA4Q9H4M7 779 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 FBXW11Q9UKB1 542 aa20.59■□□□□ 0.89
DDX55-211ENST00000544429 TCF20Q9UGU0 1960 aaKnown RBP20.59■□□□□ 0.89
DDX55-211ENST00000544429 DENND4AQ7Z401 1863 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 WDR27A2RRH5 827 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 MBTPS2O43462 519 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 VNN1O95497 513 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 KRT19P08727 400 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 PAK1Q13153 545 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 OVOS1Q6IE37 1185 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 EP400NLQ6ZTU2 488 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 PALB2Q86YC2 1186 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 GLYCTKQ8IVS8 523 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 MLKLQ8NB16 471 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 CMASQ8NFW8 434 aaPredicted RBP20.58■□□□□ 0.89
DDX55-211ENST00000544429 SPATA18Q8TC71 538 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 HPDLQ96IR7 371 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 CEP63Q96MT8 703 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 RHOBTB2Q9BYZ6 727 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 MAN1C1Q9NR34 630 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 DSEQ9UL01 958 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 CTNND2Q9UQB3 1225 aa20.58■□□□□ 0.89
DDX55-211ENST00000544429 MUC3AQ02505 3323 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 BICDL2A1A5D9 508 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 PPP3CAQ08209 521 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 SMAD2Q15796 467 aaKnown RBP20.57■□□□□ 0.88
DDX55-211ENST00000544429 CTXN3Q4LDR2 81 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 TJAP1Q5JTD0 557 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 WSCD1Q658N2 575 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 PTCRAQ6ISU1 281 aaPredicted RBP20.57■□□□□ 0.88
DDX55-211ENST00000544429 KLHL10Q6JEL2 608 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 SV2AQ7L0J3 742 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 USP37Q86T82 979 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 TOP6BLQ8N6T0 577 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 ZNF461Q8TAF7 563 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 ADAM7Q9H2U9 754 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 SFXN1Q9H9B4 322 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 DPP7Q9UHL4 492 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 L1RE1Q9UN81 338 aa20.57■□□□□ 0.88
DDX55-211ENST00000544429 OR6C75A6NL08 312 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 GABRDO14764 452 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 EPB41P11171 864 aaKnown RBP20.56■□□□□ 0.88
DDX55-211ENST00000544429 ATICP31939 592 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 GTF2H1P32780 548 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 ITIH3Q06033 890 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 MYO1EQ12965 1108 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 CLUL1Q15846 466 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 SOWAHAQ2M3V2 549 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 DPCR1Q3MIW9 517 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 RTL10Q7L3V2 364 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 DPH6Q7L8W6 267 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 FILIP1Q7Z7B0 1213 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 PDCL2Q8N4E4 241 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 KREMEN2Q8NCW0 462 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 FEZF2Q8TBJ5 459 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 RWDD2AQ9UIY3 292 aa20.56■□□□□ 0.88
DDX55-211ENST00000544429 DOCK6Q96HP0 2047 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 TULP1O00294 542 aaPredicted RBP20.55■□□□□ 0.88
DDX55-211ENST00000544429 VNN2O95498 520 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 SPATA31D3P0C874 917 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 TRIM49P0CI25 452 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 TRIM49CP0CI26 452 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 KRT13P13646 458 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 ATF2P15336 505 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 MARSP56192 900 aaKnown RBP20.55■□□□□ 0.88
DDX55-211ENST00000544429 NLRP12P59046 1061 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 MYL6P60660 151 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 NCOA4Q13772 614 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 TPGS2Q68CL5 300 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 SPATA31D4Q6ZUB0 917 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 FRMD5Q7Z6J6 570 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 TMEM86AQ8N2M4 240 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 C12orf76Q8N812 135 aaPredicted RBP20.55■□□□□ 0.88
DDX55-211ENST00000544429 OR10T2Q8NGX3 314 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 ZDHHC7Q9NXF8 308 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 MAFFQ9ULX9 164 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 USP15Q9Y4E8 981 aaPredicted RBP20.55■□□□□ 0.88
DDX55-211ENST00000544429 SNX9Q9Y5X1 595 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 NCOR1O75376 2440 aa20.55■□□□□ 0.88
DDX55-211ENST00000544429 ZMYND10O75800 440 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 FAM163BP0C2L3 166 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 IL9P15248 144 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 HOXA9P31269 272 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms