RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 GJC1P36383 396 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 MMP13P45452 471 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 CDR1P51861 262 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 SURF1Q15526 300 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 PPM1EQ8WY54 764 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 CENPTQ96BT3 561 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 CDC42EP4Q9H3Q1 356 aaKnown RBP19.12■□□□□ 0.65
VIM-209ENST00000544301 CXCL11O14625 94 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 LSM8O95777 96 aaKnown RBP19.12■□□□□ 0.65
VIM-209ENST00000544301 CALB1P05937 261 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 HOXC6P09630 235 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 PROZP22891 400 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 ITGA8P53708 1063 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 Q3C1V9 767 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 TSHZ1Q6ZSZ6 1077 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 MICALCLQ6ZW33 695 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 ERO1BQ86YB8 467 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 RHPN2Q8IUC4 686 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 DDX23Q9BUQ8 820 aaKnown RBP19.12■□□□□ 0.65
VIM-209ENST00000544301 ADAM7Q9H2U9 754 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 GGA2Q9UJY4 613 aa19.12■□□□□ 0.65
VIM-209ENST00000544301 TCRBV5S1A1TA0A578 114 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 RASGRF2O14827 1237 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 ATF2P15336 505 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 TFAMQ00059 246 aaKnown RBP19.11■□□□□ 0.65
VIM-209ENST00000544301 TRPC3Q13507 836 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 ZNF394Q53GI3 561 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 TNFAIP8L3Q5GJ75 292 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 MPZL3Q6UWV2 235 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 TADA2BQ86TJ2 420 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 DHX37Q8IY37 1157 aaKnown RBP19.11■□□□□ 0.65
VIM-209ENST00000544301 TRAPPC12Q8WVT3 735 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 SPATA33Q96N06 139 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 SCLT1Q96NL6 688 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 FAM118BQ9BPY3 351 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 AGTPBP1Q9UPW5 1226 aa19.11■□□□□ 0.65
VIM-209ENST00000544301 DNAJC25-GNG10A0A024R161 153 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 WEE2P0C1S8 567 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ADCY8P40145 1251 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 SLCO1A2P46721 670 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 CAV1Q03135 178 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 AUHQ13825 339 aaKnown RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 ERMARDQ5T6L9 678 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 FBXO16Q8IX29 292 aaPredicted RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 XPO6Q96QU8 1125 aaKnown RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 ROPN1BQ9BZX4 212 aaPredicted RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 ROPN1Q9HAT0 212 aaPredicted RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 ANAPC5Q9UJX4 755 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ACKR2O00590 384 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 GJB1P08034 283 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 CHN1P15882 459 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 TCF4P15884 667 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ZNF252P-AS1Q0IIN9 211 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 NFX1Q12986 1120 aaKnown RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 QPCTQ16769 361 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ATP13A4Q4VNC1 1196 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ATF7IP2Q5U623 682 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 GPAT2Q6NUI2 795 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 CCDC62Q6P9F0 684 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 THNSL1Q8IYQ7 743 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 WDTC1Q8N5D0 677 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 TMEM35BQ8NCS4 154 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 COPS5Q92905 334 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 ZNF668Q96K58 619 aaPredicted RBP19.1■□□□□ 0.65
VIM-209ENST00000544301 MMP19Q99542 508 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 SELENOSQ9BQE4 189 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 TRAIPQ9BWF2 469 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 XYLT2Q9H1B5 865 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 FZD8Q9H461 694 aa19.1■□□□□ 0.65
VIM-209ENST00000544301 C5orf60A6NFR6 353 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 B4GALT5O43286 388 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 KIAA0754O94854 1291 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 ASPAP45381 313 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 ZNF699Q32M78 642 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 MFSD5Q6N075 450 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 DNAJC24Q6P3W2 148 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 SCARA5Q6ZMJ2 495 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 MOB2Q70IA6 237 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 RCOR2Q8IZ40 523 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 TFAP2BQ92481 460 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 NLRP4Q96MN2 994 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 MCEEQ96PE7 176 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 JPH2Q9BR39 696 aaPredicted RBP19.09■□□□□ 0.65
VIM-209ENST00000544301 ZNF518BQ9C0D4 1074 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 STMN4Q9H169 189 aaPredicted RBP19.09■□□□□ 0.65
VIM-209ENST00000544301 KLHL11Q9NVR0 708 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
VIM-209ENST00000544301 SPDYE5A6NIY4 337 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 PI4K2BG5E9Z4 385 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 B4GALT4O60513 344 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 ACSL3O95573 720 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 VPS41P49754 854 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 LIG3P49916 1009 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 KCTD2Q14681 263 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 TMEM63BQ5T3F8 832 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 EEF1DP3Q658K8 133 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 YTHDF3Q7Z739 585 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms