RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 UTP6Q9NYH9 597 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 KANSL3Q9P2N6 904 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC13A4Q9UKG4 626 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 MAP2P11137 1827 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GOLGA8MH3BSY2 632 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ESRRBO95718 433 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 RAB27AP51159 221 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 RPL10AP62906 217 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 ARHGEF7Q14155 803 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 NFRKBQ6P4R8 1299 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC30A5Q8TAD4 765 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 UCMAQ8WVF2 138 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 L3MBTL3Q96JM7 780 aaPredicted RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 EGFL8Q99944 293 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 UVRAGQ9P2Y5 699 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GRAP2O75791 330 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC4O95801 387 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 EGFRP00533 1210 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GHRP10912 638 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 NCAM1P13591 858 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CAV1Q03135 178 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 MFSD10Q14728 455 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 SEC23AQ15436 765 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 IQSEC1Q6DN90 963 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 C4orf19Q8IY42 314 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 CAPS2Q9BXY5 557 aa7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 AGO4Q9HCK5 861 aaKnown RBP7.25□□□□□ -1.25
SRGAP1-206ENST00000543397 GLTPD2A6NH11 291 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TXNDC9O14530 226 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SUN1O94901 812 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 ACO1P21399 889 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DNAJB2P25686 324 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 NPTX2P47972 431 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 EIF3BP55884 814 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 OCRLQ01968 901 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 GPS1Q13098 491 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CDH18Q13634 790 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 GOLGA7BQ2TAP0 167 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SEZ6Q53EL9 994 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC30A10Q6XR72 485 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DNAJB3Q8WWF6 145 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 RUSC1Q9BVN2 902 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 AGPAT3Q9NRZ7 376 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SATB2Q9UPW6 733 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 MROH2AA6NES4 1674 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TMEM88BA6NKF7 163 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 C3orf70A6NLC5 250 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TBKBP1A7MCY6 615 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CABYRO75952 493 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 PDHA1P08559 390 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 HSPA8P11142 646 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 BDNFP23560 247 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 PCK1P35558 622 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CNTN2Q02246 1040 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 RCN2Q14257 317 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 NFE2Q16621 373 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 GPAT2Q6NUI2 795 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 C15orf52Q6ZUT6 534 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 KCNB2Q92953 911 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SENP6Q9GZR1 1112 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DRC3Q9H069 523 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CATSPERBQ9H7T0 1116 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 BCL2L12Q9HB09 334 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 A1CFQ9NQ94 594 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DSEQ9UL01 958 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TMEM247A6NEH6 219 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 EEF2KO00418 725 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 MED24O75448 989 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC2A3P11169 496 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC11A2P49281 568 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC7A5Q01650 507 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TWF1Q12792 350 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 AMHR2Q16671 573 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 REPS2Q8NFH8 660 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CFAP61Q8NHU2 1237 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 RNF217Q8TC41 542 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 SNX19Q92543 992 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 MCEEQ96PE7 176 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TINF2Q9BSI4 451 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 HAUS8Q9BT25 410 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 VPS11Q9H270 941 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 IL25Q9H293 177 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 AFF4Q9UHB7 1163 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CAPN11Q9UMQ6 739 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 COPEO14579 308 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 AMHP03971 560 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CHRNA3P32297 505 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 GTF2H1P32780 548 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 AVPR1AP37288 418 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 EIF3EP60228 445 aaKnown RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 PIGHQ14442 188 aaPredicted RBP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 CCDC80Q76M96 950 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 UBA3Q8TBC4 463 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TRPM4Q8TD43 1214 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 RAPGEF5Q92565 580 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 PI4K2AQ9BTU6 479 aa7.24□□□□□ -1.25
SRGAP1-206ENST00000543397 TRPM5Q9NZQ8 1165 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms