RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 ACOT1Q86TX2 421 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 CPA6Q8N4T0 437 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 TTC8Q8TAM2 541 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 ATRIPQ8WXE1 791 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 ITM2BQ9Y287 266 aa9.13□□□□□ -0.95
FNDC3A-206ENST00000541916 MAPK9P45984 424 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 UNC45BQ8IWX7 931 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 ASAP3Q8TDY4 903 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TIFAQ96CG3 184 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 MTMR12Q9C0I1 747 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 ABHD14A-ACY1A0A1B0GW23 586 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 EEF2KO00418 725 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 SERPING1P05155 500 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 CASP1P29466 404 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■■■■ 26.8
FNDC3A-206ENST00000541916 IRX4P78413 519 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 RASGRP2Q7LDG7 609 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 KDELC2Q7Z4H8 507 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 SDCCAG8Q86SQ7 713 aaPredicted RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TDRD5Q8NAT2 981 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TGS1Q96RS0 853 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 NCDNQ9UBB6 729 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 ATP5BP06576 529 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 POLR2EP19388 210 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TMTC4Q5T4D3 741 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 NPAS4Q8IUM7 802 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 RCOR1Q9UKL0 485 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 NFAT5O94916 1531 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 C10orf71Q711Q0 1435 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 ABCG4Q9H172 646 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 RNPEPQ9H4A4 650 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 IP6K2Q9UHH9 426 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 ITGA11Q9UKX5 1188 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 PASKQ96RG2 1323 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 A0A1W2PQ45 241 aaPredicted RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 A0A1W2PQY0 241 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 RHOCP08134 193 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 PCBP1Q15365 356 aaKnown RBP eCLIP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 DDX42Q86XP3 938 aaKnown RBP eCLIP9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 CARD6Q9BX69 1037 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 TRIM54Q9BYV2 358 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 DCLK3Q9C098 648 aa9.12□□□□□ -0.95
FNDC3A-206ENST00000541916 SMIM35A0A1B0GVV1 85 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 F5H423 210 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TSPAN3O60637 253 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 RECQL4O94761 1208 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 OXCT1P55809 520 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 HEATR6Q6AI08 1181 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 HDXQ7Z353 690 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ABHD8Q96I13 439 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TMEM117Q9H0C3 514 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PDGFRAP16234 1089 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ZFXP17010 805 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PRAMEP78395 509 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TAP1Q03518 808 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 VPS39Q96JC1 886 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 RUSC1Q9BVN2 902 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 XRN1Q8IZH2 1706 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 I3L4J1 428 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 GRAP2O75791 330 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 MYBL1P10243 752 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 KRT3P12035 628 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TUBB4BP68371 445 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 GRIK3Q13003 919 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 EIF2B5Q13144 721 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 DRAP1Q14919 205 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 GUF1Q8N442 669 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 GIT1Q9Y2X7 761 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TRIM49BA6NDI0 452 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 CFAP99D6REC4 459 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ACKR2O00590 384 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 FOXN1O15353 648 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 SERPIND1P05546 499 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 KRT7P08729 469 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 KPNA2P52292 529 aaKnown RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PPARDQ03181 441 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TMED2Q15363 201 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PPP2R5EQ16537 467 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 PTPN21Q16825 1174 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TPGS1Q6ZTW0 290 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 ZNF557Q8N988 423 aaPredicted RBP9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 SPATA17Q96L03 361 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 TTPALQ9BTX7 342 aa9.11□□□□□ -0.95
FNDC3A-206ENST00000541916 C1QTNF7Q9BXJ2 289 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms