RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CHI3L1P36222 383 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PRIM2P49643 509 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ZNF157P51786 506 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CSE1LP55060 971 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SHROOM1Q2M3G4 852 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SYCP2LQ5T4T6 812 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RUBCNQ92622 972 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PRMT1Q99873 361 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PITPNM2Q9BZ72 1349 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 MAGEB2O15479 319 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ETFBP38117 255 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 HMGCS2P54868 508 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 IFNEQ86WN2 208 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 LDHDQ86WU2 507 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CHSY1Q86X52 802 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 USP13Q92995 863 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 IPPQ9Y573 584 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PRAMEF22A3QJZ6 481 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SOAT2O75908 522 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ST13P50502 369 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CDH18Q13634 790 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 C10orf120Q5SQS8 335 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 KRT77Q7Z794 578 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 TBC1D10CQ8IV04 446 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 IPMKQ8NFU5 416 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PPCSQ9HAB8 311 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RAB6BQ9NRW1 208 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 KIAA0556O60303 1618 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 POLBP06746 335 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ERVK-10P10266 1014 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RAB14P61106 215 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CDC16Q13042 620 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 MTMR2Q13614 643 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 CUL4AQ13619 759 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 LAMC2Q13753 1193 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 GUF1Q8N442 669 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 BBS2Q9BXC9 721 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 KRT84Q9NSB2 600 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 ARL2BPQ9Y2Y0 163 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 RNASEH1O60930 286 aaKnown RBP11.21□□□□□ -0.61
GABRB3-204ENST00000541819 AGTP01019 485 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 ADRA2BP18089 450 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 ATP6V0D2Q8N8Y2 350 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 SLITRK1Q96PX8 696 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.21□□□□□ -0.61
GABRB3-204ENST00000541819 PHF2O75151 1096 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 DGAT1O75907 488 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 PDGFRBP09619 1106 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 HPGDP15428 266 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 PRDX5P30044 214 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 RANBP1P43487 201 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 RFX3P48380 749 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 TTC39BQ5VTQ0 682 aaPredicted RBP11.21□□□□□ -0.61
GABRB3-204ENST00000541819 SETD3Q86TU7 594 aaPredicted RBP11.21□□□□□ -0.61
GABRB3-204ENST00000541819 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 DTX3LQ8TDB6 740 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 MCEEQ96PE7 176 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 SOX13Q9UN79 622 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 COL15A1P39059 1388 aa11.21□□□□□ -0.61
GABRB3-204ENST00000541819 ESYT3A0FGR9 886 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 RRM2P31350 389 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 RFC5P40937 340 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 PWP1Q13610 501 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 KCNB1Q14721 858 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 CACHD1Q5VU97 1274 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 LONP2Q86WA8 852 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 RIN3Q8TB24 985 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 WNK4Q96J92 1243 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 NPHS2Q9NP85 383 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 PAK5Q9P286 719 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 TCP11X1B4DZS4 312 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 EXD1Q8NHP7 514 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 CENPTQ96BT3 561 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 IMPAD1Q9NX62 359 aa11.21□□□□□ -0.62
GABRB3-204ENST00000541819 PDXKO00764 312 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 NMT2O60551 498 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 SPAG6O75602 509 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 MAPK1P28482 360 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 KRT20P35900 424 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-204ENST00000541819 C4orf22Q6V702 233 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 MMGT1Q8N4V1 131 aa11.2□□□□□ -0.62
GABRB3-204ENST00000541819 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms