RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FAM167AQ96KS9 214 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 C16orf92Q96LL3 132 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 DDX23Q9BUQ8 820 aaKnown RBP6.07□□□□□ -1.44
DDB1-219ENST00000541513 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 PRDM14Q9GZV8 571 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 RNPEPQ9H4A4 650 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 GPRC5CQ9NQ84 441 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 FRRS1LQ9P0K9 344 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 GTF3C4Q9UKN8 822 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 LRRC37A3O60309 1634 aa6.07□□□□□ -1.44
DDB1-219ENST00000541513 KDRP35968 1356 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 EP400Q96L91 3159 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 IGSF1Q8N6C5 1336 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 C2orf71A6NGG8 1288 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 TMEM110-MUSTN1A8MSY1 372 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 GTPBP1O00178 669 aaKnown RBP6.06□□□□□ -1.44
DDB1-219ENST00000541513 ERAL1O75616 437 aaKnown RBP6.06□□□□□ -1.44
DDB1-219ENST00000541513 AMY2AP04746 511 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 BRAFP15056 766 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 AMY2BP19961 511 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 TGM1P22735 817 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 RXRBP28702 533 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SLC7A1P30825 629 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 IL13P35225 146 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 AFMP43652 599 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 CCR9P51686 369 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 AFF3P51826 1226 aaKnown RBP6.06□□□□□ -1.44
DDB1-219ENST00000541513 HK3P52790 923 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 LIMK1P53667 647 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 JAM2P57087 298 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 RBP5P82980 135 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 ID3Q02535 119 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 BFSP1Q12934 665 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 RAB30Q15771 203 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SMAD1Q15797 465 aaKnown RBP6.06□□□□□ -1.44
DDB1-219ENST00000541513 CTXN3Q4LDR2 81 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 FSTL4Q6MZW2 842 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 GPAT2Q6NUI2 795 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 ALKBH5Q6P6C2 394 aaKnown RBP6.06□□□□□ -1.44
DDB1-219ENST00000541513 KLHDC10Q6PID8 442 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 FAM47EQ6ZV65 393 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 CCDC91Q7Z6B0 441 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SLC9B2Q86UD5 537 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 UNC45BQ8IWX7 931 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 NUP93Q8N1F7 819 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 LRRC71Q8N4P6 559 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 STYXQ8WUJ0 223 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 RNF141Q8WVD5 230 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 HDAC10Q969S8 669 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SLX1AQ9BQ83 275 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 GPR63Q9BZJ6 419 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 CD244Q9BZW8 370 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 KCTD10Q9H3F6 313 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SYNCQ9H7C4 482 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 RPS6KA6Q9UK32 745 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 TBX20Q9UMR3 447 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 TMEM5Q9Y2B1 443 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 SBF2Q86WG5 1849 aa6.06□□□□□ -1.44
DDB1-219ENST00000541513 FAM234BA2RU67 622 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 AGAP14A8MT82 685 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 NT5C1B-RDH14C9J2C7 533 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 H0Y8X5 98 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 STXBP3O00186 592 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 SRGAP2O75044 1071 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 TSPAN9O75954 239 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 UPP2O95045 317 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 TK1P04183 234 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 EN2P19622 333 aaPredicted RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 PSMA4P25789 261 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 CASQ1P31415 396 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 KRT2P35908 639 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 MLH1P40692 756 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 FNTBP49356 437 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 CSE1LP55060 971 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 CREB5Q02930 508 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 AP1B1Q10567 949 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 ATP2B3Q16720 1220 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 MCTP2Q6DN12 878 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 NFRKBQ6P4R8 1299 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 ESPNLQ6ZVH7 1005 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 DNAJB7Q7Z6W7 309 aaPredicted RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 GALNT7Q86SF2 657 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 TRIML1Q8N9V2 468 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 ZNF384Q8TF68 577 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 NRG4Q8WWG1 115 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 RTF1Q92541 710 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 HPS1Q92902 700 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 NMD3Q96D46 503 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 IQCDQ96DY2 449 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 TWNKQ96RR1 684 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 MMP19Q99542 508 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 P2RX7Q99572 595 aaKnown RBP6.05□□□□□ -1.44
DDB1-219ENST00000541513 C7orf25Q9BPX7 421 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 HGH1Q9BTY7 390 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 TWSG1Q9GZX9 223 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 SIL1Q9H173 461 aa6.05□□□□□ -1.44
DDB1-219ENST00000541513 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms