RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MYL5Q02045 173 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 HYAL1Q12794 435 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 DUSP6Q16828 381 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 OVOS1Q6IE37 1185 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 PPFIBP1Q86W92 1011 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 CCDC150Q8NCX0 1101 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 BPIFA3Q9BQP9 254 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 CLSTN3Q9BQT9 956 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 FANCLQ9NW38 375 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 RAB20Q9NX57 234 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 NXF1Q9UBU9 619 aaKnown RBP16.65■□□□□ 0.26
DDB1-218ENST00000540784 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 N4BP1O75113 896 aaKnown RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 AFPP02771 609 aaKnown RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 ADH1AP07327 375 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 P4HA1P13674 534 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 FMO5P49326 533 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 NDUFV1P49821 464 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 ZNF165P49910 485 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 TNNC1P63316 161 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 CETN1Q12798 172 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 KCNJ12Q14500 433 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 CTXN3Q4LDR2 81 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 CBWD6Q4V339 395 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 ZNF667Q5HYK9 610 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 CBWD3Q5JTY5 395 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 CBWD5Q5RIA9 395 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 WSCD1Q658N2 575 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 TMEM86AQ8N2M4 240 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 TOP6BLQ8N6T0 577 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 FBXL13Q8NEE6 735 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 OXCT2Q9BYC2 517 aaPredicted RBP16.64■□□□□ 0.25
DDB1-218ENST00000540784 IMPG2Q9BZV3 1241 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
DDB1-218ENST00000540784 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 PMM2O15305 246 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 CAVIN2O95810 425 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
DDB1-218ENST00000540784 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
DDB1-218ENST00000540784 OR1D2P34982 312 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 GTF2F1P35269 517 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDB1-218ENST00000540784 SOWAHAQ2M3V2 549 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 TCP11X2Q5H9J9 407 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 GLYCTKQ8IVS8 523 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 EFHBQ8N7U6 833 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.251e-6■■■■■ 34.5
DDB1-218ENST00000540784 FBXL5Q9UKA1 691 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
DDB1-218ENST00000540784 TRANK1O15050 2925 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 OR6C75A6NL08 312 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 BECN2A8MW95 431 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 P4HA2O15460 535 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 TBC1D4O60343 1298 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 ASS1P00966 412 aaKnown RBP16.62■□□□□ 0.25
DDB1-218ENST00000540784 LHX1P48742 406 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 ARPP19P56211 112 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 MYL7Q01449 175 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 ADAM15Q13444 863 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 RAB33AQ14088 237 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
DDB1-218ENST00000540784 EP400NLQ6ZTU2 488 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 SLC22A17Q8WUG5 538 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 SEMA4DQ92854 862 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 ELMO3Q96BJ8 720 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 TUBGCP2Q9BSJ2 902 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
DDB1-218ENST00000540784 COL4A4P53420 1690 aaPredicted RBP16.62■□□□□ 0.25
DDB1-218ENST00000540784 ADAM12O43184 909 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 C1RP00736 705 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
DDB1-218ENST00000540784 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
DDB1-218ENST00000540784 CLCN4P51793 760 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 NCAPHQ15003 741 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 MAN2A1Q16706 1144 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms