RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 FUT10Q6P4F1 479 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 DCLRE1AQ6PJP8 1040 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 PRSS55Q6UWB4 352 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 RSPO2Q6UXX9 243 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 TMEM87AQ8NBN3 555 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 RSPH1Q8WYR4 309 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 KLHL5Q96PQ7 755 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 EPC1Q9H2F5 836 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 EPS15L1Q9UBC2 864 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 USP25Q9UHP3 1055 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 CEP295Q9C0D2 2601 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 SCN1AP35498 2009 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 EIF3DO15371 548 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 TADA2AO75478 443 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 PROS1P07225 676 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 SCP2P22307 547 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 SLFN12LQ6IEE8 588 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 ZBTB44Q8NCP5 570 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 HERC2P3Q9BVR0 1158 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 RPF1Q9H9Y2 349 aaKnown RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 WDR6Q9NNW5 1121 aaKnown RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 TOPORSQ9NS56 1045 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-205ENST00000540434 PCDHGA2Q9Y5H1 932 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
TMEM258-205ENST00000540434 PODXLO00592 558 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 LILRB5O75023 590 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
TMEM258-205ENST00000540434 B3GAT3O94766 335 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 CD72P21854 359 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 GARTP22102 1010 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 STARD6P59095 220 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 DSG1Q02413 1049 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 POSTNQ15063 836 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 FAM171A1Q5VUB5 890 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 LMBRD2Q68DH5 695 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-205ENST00000540434 APBB1IPQ7Z5R6 666 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-205ENST00000540434 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-205ENST00000540434 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 NETO1Q8TDF5 533 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 RPP25Q9BUL9 199 aaKnown RBP12.36□□□□□ -0.43
TMEM258-205ENST00000540434 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 AGPAT3Q9NRZ7 376 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 GMEB2Q9UKD1 530 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 FBXO4Q9UKT5 387 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
TMEM258-205ENST00000540434 WDFY3Q8IZQ1 3526 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 ANHXE9PGG2 379 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 TMEM189-UBE2V1I3L0A0 370 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 TEX28O15482 410 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 EXTL3O43909 919 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 PAPLNO95428 1278 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 BMP6P22004 513 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 KLRC2P26717 231 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
TMEM258-205ENST00000540434 PPP2R3AQ06190 1150 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 ALCAMQ13740 583 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 KNOP1Q1ED39 458 aaKnown RBP12.35□□□□□ -0.43
TMEM258-205ENST00000540434 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 ISM2Q6H9L7 571 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
TMEM258-205ENST00000540434 NELL1Q92832 810 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 CLSTN3Q9BQT9 956 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms