RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 SNW1Q13573 536 aaKnown RBP9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 RAB33AQ14088 237 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 UBXN2BQ14CS0 331 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 MLF2Q15773 248 aaPredicted RBP9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 PABPC1LQ4VXU2 614 aaKnown RBP9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 GLRA4Q5JXX5 417 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 TTC38Q5R3I4 469 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 PARM1Q6UWI2 310 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 FAM184AQ8NB25 1140 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 ST13P5Q8NFI4 369 aaPredicted RBP9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 BSNDQ8WZ55 320 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 FGF14Q92915 247 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 FOXQ1Q9C009 403 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 KCNH3Q9ULD8 1083 aa9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 MRPS23Q9Y3D9 190 aaKnown RBP9.9□□□□□ -0.82
CCDC144NL-203ENST00000539484 H7C4K7 107 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 F11P03951 625 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 POU2F2P09086 479 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 SP9P0CG40 484 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 MAGEA9P43362 315 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 CLCNKBP51801 687 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 SLC44A4Q53GD3 710 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 EEF1DP3Q658K8 133 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 RSPO2Q6UXX9 243 aaPredicted RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 KIAA2013Q8IYS2 634 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 ELMOD1Q8N336 334 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 ING5Q8WYH8 240 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 SECISBP2LQ93073 1101 aaKnown RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 BORCS6Q96GS4 357 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 KRTAP4-12Q9BQ66 201 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 KXD1Q9BQD3 176 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 TCHPQ9BT92 498 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 RPP25Q9BUL9 199 aaKnown RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 CCDC113Q9H0I3 377 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 BHMT2Q9H2M3 363 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 FOXP1Q9H334 677 aaPredicted RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 SPATA6Q9NWH7 488 aaPredicted RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 MTRRQ9UBK8 725 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 LRWD1Q9UFC0 647 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 MRPS17Q9Y2R5 130 aaKnown RBP9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 NUB1Q9Y5A7 615 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 CDY1Q9Y6F8 540 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 USP34Q70CQ2 3546 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 TCHHQ07283 1943 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 SPTBN4Q9H254 2564 aa9.89□□□□□ -0.83
CCDC144NL-203ENST00000539484 EP300Q09472 2414 aaPredicted RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 TICRRQ7Z2Z1 1910 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 ANK1P16157 1881 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 FAM170BA6NMN3 283 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 PRRG1O14668 218 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 ADAM12O43184 909 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 PTPN2P17706 415 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 FGFR3P22607 806 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 ARPP19P56211 112 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 PEX3P56589 373 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 HMGN5P82970 282 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 DOC2BQ14184 412 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 CCDC83Q8IWF9 413 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 GOLGA6L1Q8N7Z2 621 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 ITFG1Q8TB96 612 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 RUBCNQ92622 972 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 MCRS1Q96EZ8 462 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 NELL2Q99435 816 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 LLPHQ9BRT6 129 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 KIFC3Q9BVG8 833 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 MRPL4Q9BYD3 311 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 OSBPL6Q9BZF3 934 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 TIMMDC1Q9NPL8 285 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 HCFC1R1Q9NWW0 138 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 GDE1Q9NZC3 331 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 DNMT3BQ9UBC3 853 aaKnown RBP9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 KIAA1024Q9UPX6 916 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 DNM3Q9UQ16 869 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 BACE2Q9Y5Z0 518 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 CFAP54Q96N23 3096 aa9.88□□□□□ -0.83
CCDC144NL-203ENST00000539484 F5P12259 2224 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 PODXLO00592 558 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 ZNF197O14709 1029 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 GNB5O14775 395 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 RHOP08100 348 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 MATR3P43243 847 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 CHRNA4P43681 627 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 BRCC3P46736 316 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 OSTNP61366 133 aa9.87□□□□□ -0.83
CCDC144NL-203ENST00000539484 STRN3Q13033 797 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms