RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 OLA1Q9NTK5 396 aaKnown RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 MARCOQ9UEW3 520 aaPredicted RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CCDC22O60826 627 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 MED24O75448 989 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CUL3Q13618 768 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 NTRK3Q16288 839 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 FAM117BQ6P1L5 589 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 PGBD3Q8N328 593 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 MDM1Q8TC05 714 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 GIPC2Q8TF65 315 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 AFG1LQ8WV93 481 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 ZBTB18Q99592 522 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CHMP2BQ9UQN3 213 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 PCDHB7Q9Y5E2 793 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 PCDHB2Q9Y5E7 798 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CCDC78A2IDD5 438 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 WEE2P0C1S8 567 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PGM1P36871 562 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 SMTNL2Q2TAL5 461 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PACSIN1Q9BY11 444 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 LACRTQ9GZZ8 138 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 WWP1Q9H0M0 922 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PDHXO00330 501 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 HSD17B3P37058 310 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 CLMNQ96JQ2 1002 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 SEMA6BQ9H3T3 888 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 DONSONQ9NYP3 566 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PRAMEP78395 509 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 DTX3LQ8TDB6 740 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 ZC3H7BQ9UGR2 993 aaKnown RBP15.26■□□□□ 0.03
CACNB1-206ENST00000539338 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
CACNB1-206ENST00000539338 FAM47DPA6NHR8 397 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 AMHP03971 560 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PON1P27169 355 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 PPARGP37231 505 aaPredicted RBP15.26■□□□□ 0.03
CACNB1-206ENST00000539338 HERVK_113P62684 666 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 SGSM1Q2NKQ1 1148 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 RIT2Q99578 217 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 TSSK1BQ9BXA7 367 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
CACNB1-206ENST00000539338 CABYRO75952 493 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 MAGEA4P43358 317 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 SEC23AQ15436 765 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 CEP70Q8NHQ1 597 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PSMC3IPQ9P2W1 217 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 ARHGEF28Q8N1W1 1705 aaKnown RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 EEF1DP29692 281 aaKnown RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 RECQLP46063 649 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 INPP1P49441 399 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 SULT1E1P49888 294 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 EFTUD2Q15029 972 aaKnown RBP eCLIP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 MOV10L1Q9BXT6 1211 aaKnown RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 SP110Q9HB58 689 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 H2AFXP16104 143 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PPP4CP60510 307 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PIGHQ14442 188 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 INTS5Q6P9B9 1019 aaKnown RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 UNC45AQ9H3U1 944 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 KBTBD4Q9NVX7 518 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 MROH7Q68CQ1 1323 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PPP1R12AO14974 1030 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 CASP4P49662 377 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 DEUP1Q05D60 604 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 KIF2BQ8N4N8 673 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 ERP27Q96DN0 273 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 ZNF560Q96MR9 790 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 POLR3CQ9BUI4 534 aaPredicted RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 MAGEB5Q9BZ81 275 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PSD3Q9NYI0 1048 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PIN4Q9Y237 131 aaKnown RBP15.25■□□□□ 0.03
CACNB1-206ENST00000539338 PCDHB12Q9Y5F1 795 aa15.25■□□□□ 0.03
CACNB1-206ENST00000539338 RNF103-CHMP3A0A140T963 221 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 UBA6A0AVT1 1052 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 LRRIQ3A6PVS8 624 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 FOXP2O15409 715 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 E2F6O75461 281 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 ARHGAP15Q53QZ3 475 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 SPON2Q9BUD6 331 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 GPRC5DQ9NZD1 345 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 MYOM1P52179 1685 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 ITSN1Q15811 1721 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 F8W8V4 182 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 PDGFRBP09619 1106 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 RALAP11233 206 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 GTF2H1P32780 548 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 PTGISQ16647 500 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms