RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 KAT5Q92993 513 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 HAPLN3Q96S86 360 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 DMRTA2Q96SC8 542 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 MRPS18AQ9NVS2 196 aaKnown RBP6.91□□□□□ -1.3
CCDC7-209ENST00000539197 ZNF70Q9UC06 446 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-209ENST00000539197 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-209ENST00000539197 IPPQ9Y573 584 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 GCOM1H8Y6P7 765 aaPredicted RBP6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA12O60330 932 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 MT-CO1P00395 513 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 RHOP08100 348 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 NXPH1P58417 271 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 ITIH3Q06033 890 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
CCDC7-209ENST00000539197 ACAP2Q15057 778 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 SRSF7Q16629 238 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC7-209ENST00000539197 INAVAQ3KP66 663 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 ZNF365Q70YC5 407 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 BHLHA9Q7RTU4 235 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 HDAC10Q969S8 669 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA9Q9Y5G4 932 aaKnown RBP6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA8Q9Y5G5 932 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA7Q9Y5G6 932 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA6Q9Y5G7 932 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 PCDHGA3Q9Y5H0 932 aa6.9□□□□□ -1.3
CCDC7-209ENST00000539197 WDR27A2RRH5 827 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 PROB1E7EW31 1015 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 HTRA2O43464 458 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-209ENST00000539197 EZH2Q15910 746 aaKnown RBP6.89□□□□□ -1.31
CCDC7-209ENST00000539197 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 SLC30A10Q6XR72 485 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 AOPEPQ8N6M6 819 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-209ENST00000539197 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
CCDC7-209ENST00000539197 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
CCDC7-209ENST00000539197 ADGRA2Q96PE1 1338 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 E7ENX8 843 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 SGTAO43765 313 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 SLC16A1P53985 500 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 POU6F2P78424 691 aaPredicted RBP6.88□□□□□ -1.31
CCDC7-209ENST00000539197 TAP2Q03519 686 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 TLE1Q04724 770 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 CLPTM1LQ96KA5 538 aa6.88□□□□□ -1.31
CCDC7-209ENST00000539197 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 TFF2Q03403 129 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 RAB39AQ14964 217 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 TMEM119Q4V9L6 283 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 LCE1AQ5T7P2 110 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 ZNF425Q6IV72 752 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 GADL1Q6ZQY3 521 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 TRIB1Q96RU8 372 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 SERPINB13Q9UIV8 391 aa6.87□□□□□ -1.31
CCDC7-209ENST00000539197 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 TTLL1O95922 423 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 LPOP22079 712 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 NPTX2P47972 431 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 SLC10A2Q12908 348 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 LLGL1Q15334 1064 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 ZNF782Q6ZMW2 699 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 SMOQ99835 787 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 VRK1Q99986 396 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-209ENST00000539197 MKS1Q9NXB0 559 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 SLC5A4Q9NY91 659 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 FLRT1Q9NZU1 646 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 DKK3Q9UBP4 350 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 PADI4Q9UM07 663 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 NR2E3Q9Y5X4 410 aa6.86□□□□□ -1.31
CCDC7-209ENST00000539197 CLSTN1O94985 981 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 ANXA1P04083 346 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 KRTAP10-9P60411 292 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 GRM1Q13255 1194 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 ABCB5Q2M3G0 1257 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 FAM9AQ8IZU1 332 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-209ENST00000539197 RFKQ969G6 155 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 PBKQ96KB5 322 aa6.85□□□□□ -1.31
CCDC7-209ENST00000539197 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-209ENST00000539197 A0A0B4J269 797 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 LINC01548A6NM66 108 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 NR2F6P10588 404 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 PSMC1P62191 440 aaKnown RBP6.84□□□□□ -1.31
CCDC7-209ENST00000539197 KIF23Q02241 960 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-209ENST00000539197 TUBB3Q13509 450 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 PPP4R3AQ6IN85 833 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 ZNF366Q8N895 744 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-209ENST00000539197 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 POC1BQ8TC44 478 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 SERGEFQ9UGK8 458 aa6.84□□□□□ -1.31
CCDC7-209ENST00000539197 SPATA31A3Q5VYP0 1347 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 LRRC14BA6NHZ5 514 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms