RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TAF6P49848 677 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 MTF1Q14872 753 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 WDR59Q6PJI9 974 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 RAD9BQ6WBX8 426 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 RRAGAQ7L523 313 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 FBXL13Q8NEE6 735 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ZNF397Q8NF99 534 aaPredicted RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 PI4K2AQ9BTU6 479 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 NAA15Q9BXJ9 866 aaKnown RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 XYLT2Q9H1B5 865 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 STAU1O95793 577 aaKnown RBP18.48■□□□□ 0.55
CLN6-202ENST00000538696 PNPLA4P41247 253 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 BRCC3P46736 316 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLN6-202ENST00000538696 MEA1Q16626 185 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 SPOPLQ6IQ16 392 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 GJB7Q6PEY0 223 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 EHBP1Q8NDI1 1231 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 LMO3Q8TAP4 145 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 IGSF21Q96ID5 467 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 HPDLQ96IR7 371 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 TGS1Q96RS0 853 aaKnown RBP18.48■□□□□ 0.55
CLN6-202ENST00000538696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.48■□□□□ 0.555e-7■■■■■ 90.8
CLN6-202ENST00000538696 RAB20Q9NX57 234 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 ADAM28Q9UKQ2 775 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 RWDD3Q9Y3V2 267 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 PCDHB12Q9Y5F1 795 aa18.48■□□□□ 0.55
CLN6-202ENST00000538696 CARNS1A5YM72 827 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 USP27XA6NNY8 438 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 I3L4J1 428 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 ASS1P00966 412 aaKnown RBP18.47■□□□□ 0.55
CLN6-202ENST00000538696 UCHL3P15374 230 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 ATICP31939 592 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 PPM1AP35813 382 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 BMPR1AP36894 532 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 LILRA4P59901 499 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 ERVK-21P61565 698 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 ZNF699Q32M78 642 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 SV2CQ496J9 727 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 PPP2R2DQ66LE6 453 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 IQCEQ6IPM2 695 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 TMTC1Q8IUR5 882 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 TIFAQ96CG3 184 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 CHP1Q99653 195 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 VN1R3Q9BXE9 311 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 VRTNQ9H8Y1 702 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
CLN6-202ENST00000538696 SPG21Q9NZD8 308 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 R3HCC1Q9Y3T6 440 aaKnown RBP18.47■□□□□ 0.55
CLN6-202ENST00000538696 NUB1Q9Y5A7 615 aa18.47■□□□□ 0.55
CLN6-202ENST00000538696 C5orf67F2Z3F1 127 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 TADA2AO75478 443 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 EFEMP2O95967 443 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 HNRNPH3P31942 346 aaKnown RBP18.46■□□□□ 0.55
CLN6-202ENST00000538696 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
CLN6-202ENST00000538696 CETN1Q12798 172 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 MYO1EQ12965 1108 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 SGSM1Q2NKQ1 1148 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 TSR1Q2NL82 804 aaKnown RBP18.46■□□□□ 0.55
CLN6-202ENST00000538696 TIGD5Q53EQ6 642 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 FUT10Q6P4F1 479 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 CYP26C1Q6V0L0 522 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 TOGARAM2Q6ZUX3 1019 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 RNF168Q8IYW5 571 aaPredicted RBP18.46■□□□□ 0.55
CLN6-202ENST00000538696 KLHL23Q8NBE8 558 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 TAF4BQ92750 862 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 SAMD11Q96NU1 681 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 PLVAPQ9BX97 442 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 SPTLC3Q9NUV7 552 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 ZNHIT6Q9NWK9 470 aaKnown RBP18.46■□□□□ 0.55
CLN6-202ENST00000538696 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 MTUS1Q9ULD2 1270 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 POLIQ9UNA4 740 aa18.46■□□□□ 0.55
CLN6-202ENST00000538696 KPNA7A9QM74 516 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 FGF18O76093 207 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 CLSTN1O94985 981 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 RAPGEF1Q13905 1077 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 CCAR2Q8N163 923 aaKnown RBP18.45■□□□□ 0.54
CLN6-202ENST00000538696 TMEM169Q96HH4 297 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 SUSD3Q96L08 255 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 DESI2Q9BSY9 194 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 GPR62Q9BZJ7 368 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 SLC28A3Q9HAS3 691 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 TRMT1Q9NXH9 659 aaKnown RBP18.45■□□□□ 0.54
CLN6-202ENST00000538696 GDAP2Q9NXN4 497 aa18.45■□□□□ 0.54
CLN6-202ENST00000538696 SF3B1O75533 1304 aaKnown RBP eCLIP18.45■□□□□ 0.548e-9■■■■■ 155.1
CLN6-202ENST00000538696 M0QZQ0 153 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 SOX1O00570 391 aaPredicted RBP18.44■□□□□ 0.54
CLN6-202ENST00000538696 PAX3P23760 479 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 JAM2P57087 298 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 CDK17Q00537 523 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 PLCB3Q01970 1234 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 ZNF667Q5HYK9 610 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 SFMBT2Q5VUG0 894 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 DSTYKQ6XUX3 929 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 ARHGEF19Q8IW93 802 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms