RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RARGP13631 454 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 INSRRP14616 1297 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 CD58P19256 250 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SLMAPQ14BN4 828 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 LLGL1Q15334 1064 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 LINC01465Q8N7H1 131 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 CEP120Q8N960 986 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 GPRC5AQ8NFJ5 357 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 ZBTB10Q96DT7 871 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SLC10A4Q96EP9 437 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 RPF1Q9H9Y2 349 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 GPR25O00155 361 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 TP73O15350 636 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 MAGEB2O15479 319 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 LGALS2P05162 132 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 WEE2P0C1S8 567 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 RALAP11233 206 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 ITIH2P19823 946 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 IVDP26440 423 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 LSP1P33241 339 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 PHKA2P46019 1235 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 RPL7AP62424 266 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 CCNA1P78396 465 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 GUCY1A3Q02108 690 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 KRT17Q04695 432 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 PTK6Q13882 451 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 CCNG2Q16589 344 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 DAB2IPQ5VWQ8 1189 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 DENND2CQ68D51 928 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 WDTC1Q8N5D0 677 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 GRK7Q8WTQ7 553 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 TLCD1Q96CP7 247 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM109Q9BVC6 243 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 VTA1Q9NP79 307 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 RSPH14Q9UHP6 348 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SLC12A6Q9UHW9 1150 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 GJB6O95452 261 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 GH1P01241 217 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 SHBGP04278 402 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 OSTNP61366 133 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 SNX1Q13596 522 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 SLC29A2Q14542 456 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 AMHR2Q16671 573 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 CDR2LQ86X02 465 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM192Q8IY95 271 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 EPN3Q9H201 632 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 LRRC4CQ9HCJ2 640 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 UNCXA6NJT0 531 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 GAS8O95995 478 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 CXCL8P10145 99 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 MCF2P10911 925 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 HPDP32754 393 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 TAP1Q03518 808 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 PTGISQ16647 500 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 PGM2Q96G03 612 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
SLC28A1-204ENST00000538177 EVPLQ92817 2033 aa12.1□□□□□ -0.47
SLC28A1-204ENST00000538177 COL1A2P08123 1366 aa12.1□□□□□ -0.47
SLC28A1-204ENST00000538177 LACTBL1A8MY62 500 aa12.1□□□□□ -0.47
SLC28A1-204ENST00000538177 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms