RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SERHL2Q9H4I8 314 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SERHLQ9NQF3 203 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 RPRD1BQ9NQG5 326 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CTNNAL1Q9UBT7 734 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KDM6BO15054 1643 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TBC1D12O60347 775 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CYP2E1P05181 493 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 HOXB7P09629 217 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 LRPAP1P30533 357 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SERPINB5P36952 375 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ITGA8P53708 1063 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 LGALS3BPQ08380 585 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CTTNQ14247 550 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 FAM45BPQ6NSW5 357 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CYFIP1Q7L576 1253 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SETD3Q86TU7 594 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SULF1Q8IWU6 871 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 HPS1Q92902 700 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CAVIN3Q969G5 261 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CITED4Q96RK1 184 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 GALNT8Q9NY28 637 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PHTF1Q9UMS5 762 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 GYPCP04921 128 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 RAG1P15918 1043 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ATF4P18848 351 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KCNJ1P48048 391 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 GCLMP48507 274 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KBTBD2Q8IY47 623 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CPXCR1Q8N123 301 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ERP44Q9BS26 406 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 HMG20AQ9NP66 347 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 A0A1W2PQC6 194 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 RIMBP2O15034 1052 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 YWHABP31946 246 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SCNN1BP51168 640 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SGO1Q5FBB7 561 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 AKAP14Q86UN6 197 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 OR6P1Q8NGX9 317 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 C19orf60Q96EN9 201 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SHROOM2Q13796 1616 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PBRM1Q86U86 1689 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 A2MP01023 1474 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM64CA6NLI5 447 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CLOCKO15516 846 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 EIF3EP60228 445 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PLBD2Q8NHP8 589 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ANKRD36BP1Q96IX9 119 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TIMMDC1Q9NPL8 285 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ENTPD7Q9NQZ7 604 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ADD3Q9UEY8 706 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 XPO7Q9UIA9 1087 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 THRAP3Q9Y2W1 955 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CBX6O95503 412 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SRGAP2CP0DJJ0 459 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SLC29A2Q14542 456 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 OR6B2Q6IFH4 312 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TTC13Q8NBP0 860 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SUN5Q8TC36 379 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 MAGED4Q96JG8 741 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KIAA1683Q9H0B3 1180 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 MYLK2Q9H1R3 596 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KMT5AQ9NQR1 393 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PTCH1Q13635 1447 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PRLP01236 227 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 IL13P35225 146 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 CNGA2Q16280 664 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ARID3BQ8IVW6 561 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 SKA1Q96BD8 255 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FAM111AQ96PZ2 611 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 CASS4Q9NQ75 786 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PICK1Q9NRD5 415 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF212Q9UDV6 495 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 LOC100653049A0A140TA62 436 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM43BA6NCK2 446 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 KRT34O76011 436 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 UFL1O94874 794 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 MTM1Q13496 603 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PDK3Q15120 406 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 DENND6AQ8IWF6 608 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FOXP3Q9BZS1 431 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 LEMD3Q9Y2U8 911 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 YEATS2Q9ULM3 1422 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 C5orf58C9J3I9 102 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FOXP2O15409 715 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TLR3O15455 904 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 RPS6KA5O75582 802 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 SNRPAP09012 282 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 POLR2MP0CAP2 368 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TFE3P19532 575 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 CSTF3Q12996 717 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TSC22D1Q15714 1073 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM71Q2Q1W2 868 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 GCNAQ96QF7 691 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 GPATCH8Q9UKJ3 1502 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 POGZQ7Z3K3 1410 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 MROH5Q6ZUA9 1318 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TTLL1O95922 423 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF23P17027 643 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 LBRQ14739 615 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms