RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 ZBTB21Q9ULJ3 1066 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 HDAC5Q9UQL6 1122 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 SIK3Q9Y2K2 1263 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 A0A1W2PP64 1363 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 ATRNL1Q5VV63 1379 aa7.04□□□□□ -1.28
CLIP1-207ENST00000536634 TNRC18O15417 2968 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-207ENST00000536634 SBF1O95248 1867 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 ALG1L2C9J202 215 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 MMP10P09238 476 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 RBP3P10745 1247 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 SLC6A9P48067 706 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 ACAP2Q15057 778 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 LSM12Q3MHD2 195 aaKnown RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 RABL3Q5HYI8 236 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 PDZD4Q76G19 769 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 SYT12Q8IV01 421 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 C16orf71Q8IYS4 520 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 PQLC1Q8N2U9 271 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 RNF169Q8NCN4 708 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 UHRF1Q96T88 793 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-207ENST00000536634 PLEKHG2Q9H7P9 1386 aa7.03□□□□□ -1.28
CLIP1-207ENST00000536634 NSD3Q9BZ95 1437 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 C4AP0C0L4 1744 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 PRR5-ARHGAP8B1AHC4 643 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 B5MCH6 92 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 NARSO43776 548 aaKnown RBP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 FSHBP01225 129 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 ALOX15P16050 662 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 DPEP1P16444 411 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 C5AR1P21730 350 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 APOBEC3AP31941 199 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 FLT3LGP49771 235 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 ITPK1Q13572 414 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 TUBA3CQ13748 450 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 METTL24Q5JXM2 366 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 TUBA3EQ6PEY2 450 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 FAM180AQ6UWF9 173 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 ZNF572Q7Z3I7 529 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 NRG4Q8WWG1 115 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 STON2Q8WXE9 905 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 FUBP3Q96I24 572 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 ASPSCR1Q9BZE9 553 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 SORCS3Q9UPU3 1222 aa7.02□□□□□ -1.29
CLIP1-207ENST00000536634 ROCK2O75116 1388 aaKnown RBP7.02□□□□□ -1.29
CLIP1-207ENST00000536634 TNKSO95271 1327 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 TBKBP1A7MCY6 615 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 CXorf49A8MYA2 514 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-207ENST00000536634 LEFTY2O00292 366 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 XPOTO43592 962 aaKnown RBP7.01□□□□□ -1.29
CLIP1-207ENST00000536634 NDUFS2O75306 463 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 FPR1P21462 350 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 KCNA3P22001 575 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 GUCY1A2P33402 732 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 PER3P56645 1201 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 TGFB2P61812 414 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 FAM47AQ5JRC9 791 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 RPUSD2Q8IZ73 545 aaKnown RBP7.01□□□□□ -1.29
CLIP1-207ENST00000536634 SLC16A11Q8NCK7 471 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 OR10H5Q8NGA6 315 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLIP1-207ENST00000536634 PIGBQ92521 554 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
CLIP1-207ENST00000536634 NDC1Q9BTX1 674 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 TMPRSS5Q9H3S3 457 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 SLC2A4RGQ9NR83 387 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 HS3ST3A1Q9Y663 406 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 PCDH11XQ9BZA7 1347 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 PCDH11YQ9BZA8 1340 aa7.01□□□□□ -1.29
CLIP1-207ENST00000536634 SHTN1A0MZ66 631 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 KLHL33A6NCF5 533 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 AKAP8O43823 692 aaKnown RBP7□□□□□ -1.29
CLIP1-207ENST00000536634 FZD7O75084 574 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 ZNF202O95125 648 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 AMPHP49418 695 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 RRS1Q15050 365 aaKnown RBP7□□□□□ -1.29
CLIP1-207ENST00000536634 CPT1CQ8TCG5 803 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 SSH1Q8WYL5 1049 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 TFAP2CQ92754 450 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 TEKT5Q96M29 485 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
CLIP1-207ENST00000536634 ZNF768Q9H5H4 540 aaKnown RBP7□□□□□ -1.29
CLIP1-207ENST00000536634 LANCL2Q9NS86 450 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 RNF181Q9P0P0 153 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 AJAP1Q9UKB5 411 aaPredicted RBP7□□□□□ -1.29
CLIP1-207ENST00000536634 INTUQ9ULD6 942 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 CGNL1Q0VF96 1302 aa7□□□□□ -1.29
CLIP1-207ENST00000536634 RTL1A6NKG5 1358 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 RPS6KA4O75676 772 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 ENDOD1O94919 500 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 SCAF4O95104 1147 aaKnown RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 NR4A1P22736 598 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 PCSK1P29120 753 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 ACVRL1P37023 503 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 ALDH1A3P47895 512 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 SP140Q13342 867 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms