RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PWWP2AQ96N64 755 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 DOCK1Q14185 1865 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 CALB1P05937 261 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MAGEA4P43358 317 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 COPS2P61201 443 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 RPL7AP62424 266 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 MCL1Q07820 350 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 P3H1Q32P28 736 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 CYP4X1Q8N118 509 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 RIBC1Q8N443 379 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 RBM15Q96T37 977 aaKnown RBP eCLIP16.98■□□□□ 0.319e-7■■■□□ 19
CHMP1A-202ENST00000535997 FAM118BQ9BPY3 351 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 NRBP2Q9NSY0 501 aa16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 DRG1Q9Y295 367 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-202ENST00000535997 LIASO43766 372 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 MGRN1O60291 552 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 SUN1O94901 812 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 LSM8O95777 96 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 ASS1P00966 412 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 GRM1Q13255 1194 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 MPP2Q14168 576 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 NUGGCQ68CJ6 796 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 UBR7Q8N806 425 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 GBP7Q8N8V2 638 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 CFAP57Q96MR6 1250 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF518BQ9C0D4 1074 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 FGFR1OP2Q9NVK5 253 aa16.97■□□□□ 0.31
CHMP1A-202ENST00000535997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.311e-9■□□□□ 8
CHMP1A-202ENST00000535997 GSTTP1A0A1W2PQM5 241 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 ADCY3O60266 1144 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 TGFB2P61812 414 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 SMYD5Q6GMV2 418 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 PPP1R21Q6ZMI0 780 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 C9orf72Q96LT7 481 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 SLITRK1Q96PX8 696 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 EURLQ9NYK6 297 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 CST3P01034 146 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 GMPSP49915 693 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 NR1H3Q13133 447 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 ATP13A4Q4VNC1 1196 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 DALRD3Q5D0E6 543 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 WDR49Q8IV35 697 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 ANKRD42Q8N9B4 389 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 MAGEB18Q96M61 343 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 NKIRAS1Q9NYS0 192 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 TBK1Q9UHD2 729 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 DNPEPQ9ULA0 475 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 ZNF148Q9UQR1 794 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
CHMP1A-202ENST00000535997 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 CFAP73A6NFT4 308 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 STX2P32856 288 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 RDXP35241 583 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 GJC1P36383 396 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 EFNA5P52803 228 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 TAP1Q03518 808 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 BRSK2Q8IWQ3 736 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 TTC25Q96NG3 672 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 NDC80O14777 642 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 GJB6O95452 261 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 EDN1P05305 212 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 CETPP11597 493 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 KRT10P13645 584 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 PTPN7P35236 360 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 SF3A3Q12874 501 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 PIGHQ14442 188 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 SGSM1Q2NKQ1 1148 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 ZFYVE27Q5T4F4 411 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 DCUN1D2Q6PH85 259 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 MFSD7Q6UXD7 560 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 CCDC91Q7Z6B0 441 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 SRRM1Q8IYB3 904 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 TMEM35BQ8NCS4 154 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 MAML1Q92585 1016 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 CD248Q9HCU0 757 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 ARL2BPQ9Y2Y0 163 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 IVNS1ABPQ9Y6Y0 642 aa16.95■□□□□ 0.3
CHMP1A-202ENST00000535997 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 FOXO6A8MYZ6 492 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 PI4K2BG5E9Z4 385 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TOM1L1O75674 476 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 EIF4BP23588 611 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 CAPSQ13938 189 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 KAZNQ674X7 775 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 SEPT14Q6ZU15 432 aa16.94■□□□□ 0.3
CHMP1A-202ENST00000535997 TDRPQ86YL5 185 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms