RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 UVRAGQ9P2Y5 699 aa20.02■□□□□ 0.8
CLPB-205ENST00000535477 HMGXB4Q9UGU5 601 aa20.02■□□□□ 0.8
CLPB-205ENST00000535477 TRPV2Q9Y5S1 764 aa20.02■□□□□ 0.8
CLPB-205ENST00000535477 CITO14578 2027 aa20.02■□□□□ 0.8
CLPB-205ENST00000535477 MTA2O94776 668 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 P4HA1P13674 534 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 COMTP21964 271 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 TNNC1P63316 161 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 C11orf63Q6NUN7 778 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 CPNE8Q86YQ8 564 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 CALR3Q96L12 384 aaKnown RBP20.02■□□□□ 0.79
CLPB-205ENST00000535477 IPPQ9Y573 584 aa20.02■□□□□ 0.79
CLPB-205ENST00000535477 BRCA2P51587 3418 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 GRIN2DO15399 1336 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 PPEF2O14830 753 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 DDX3YO15523 660 aaKnown RBP20.01■□□□□ 0.79
CLPB-205ENST00000535477 RPS6KA5O75582 802 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 CHRNA1P02708 482 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 RAD23BP54727 409 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 PTGISQ16647 500 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 CCSAPQ6IQ19 270 aaPredicted RBP20.01■□□□□ 0.79
CLPB-205ENST00000535477 ALKAL1Q6UXT8 129 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 SERINC5Q86VE9 423 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 TRIM11Q96F44 468 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 TWNKQ96RR1 684 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 CFHR5Q9BXR6 569 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 TRIM7Q9C029 511 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 VRTNQ9H8Y1 702 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 DDX20Q9UHI6 824 aaKnown RBP20.01■□□□□ 0.79
CLPB-205ENST00000535477 ANAPC7Q9UJX3 599 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 DERAQ9Y315 318 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 HTTP42858 3142 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 CASP8AP2Q9UKL3 1982 aa20.01■□□□□ 0.79
CLPB-205ENST00000535477 CES2O00748 559 aa20■□□□□ 0.79
CLPB-205ENST00000535477 MYBL1P10243 752 aa20■□□□□ 0.79
CLPB-205ENST00000535477 THPOP40225 353 aa20■□□□□ 0.79
CLPB-205ENST00000535477 ITIH3Q06033 890 aa20■□□□□ 0.79
CLPB-205ENST00000535477 MYO1EQ12965 1108 aa20■□□□□ 0.79
CLPB-205ENST00000535477 ZBTB6Q15916 424 aa20■□□□□ 0.79
CLPB-205ENST00000535477 MTERF4Q7Z6M4 381 aaKnown RBP20■□□□□ 0.79
CLPB-205ENST00000535477 MMGT1Q8N4V1 131 aa20■□□□□ 0.79
CLPB-205ENST00000535477 PCSK9Q8NBP7 692 aaKnown RBP20■□□□□ 0.79
CLPB-205ENST00000535477 SMG8Q8ND04 991 aaKnown RBP20■□□□□ 0.79
CLPB-205ENST00000535477 C1orf131Q8NDD1 294 aaKnown RBP20■□□□□ 0.79
CLPB-205ENST00000535477 BEST2Q8NFU1 509 aa20■□□□□ 0.79
CLPB-205ENST00000535477 WHAMMQ8TF30 809 aa20■□□□□ 0.79
CLPB-205ENST00000535477 CNTN3Q9P232 1028 aa20■□□□□ 0.79
CLPB-205ENST00000535477 ST3GAL5Q9UNP4 418 aa20■□□□□ 0.79
CLPB-205ENST00000535477 SEC31AO94979 1220 aaKnown RBP20■□□□□ 0.79
CLPB-205ENST00000535477 MAP2K2P36507 400 aa20■□□□□ 0.79
CLPB-205ENST00000535477 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
CLPB-205ENST00000535477 LIN9Q5TKA1 542 aa20■□□□□ 0.79
CLPB-205ENST00000535477 TMCO3Q6UWJ1 677 aa20■□□□□ 0.79
CLPB-205ENST00000535477 SESTD1Q86VW0 696 aa20■□□□□ 0.79
CLPB-205ENST00000535477 PHF13Q86YI8 300 aaPredicted RBP20■□□□□ 0.79
CLPB-205ENST00000535477 USP38Q8NB14 1042 aa20■□□□□ 0.79
CLPB-205ENST00000535477 LRRC1Q9BTT6 524 aa20■□□□□ 0.79
CLPB-205ENST00000535477 ELOVL4Q9GZR5 314 aa20■□□□□ 0.79
CLPB-205ENST00000535477 SMIM28A0A1B0GU29 152 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 SPOPO43791 374 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 CILPO75339 1184 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 ZMYND10O75800 440 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 VSNL1P62760 191 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 ZNF211Q13398 564 aaPredicted RBP19.99■□□□□ 0.79
CLPB-205ENST00000535477 DCAF12L1Q5VU92 463 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 DPH6Q7L8W6 267 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 RNF180Q86T96 592 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 CYP3A43Q9HB55 503 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 AVENQ9NQS1 362 aaPredicted RBP19.99■□□□□ 0.79
CLPB-205ENST00000535477 ZNF446Q9NWS9 450 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 SNX9Q9Y5X1 595 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 TRIP11Q15643 1979 aa19.99■□□□□ 0.79
CLPB-205ENST00000535477 TLR3O15455 904 aaKnown RBP19.98■□□□□ 0.79
CLPB-205ENST00000535477 CST5P28325 142 aaPredicted RBP19.98■□□□□ 0.79
CLPB-205ENST00000535477 MARCKSL1P49006 195 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 CCDC70Q6NSX1 233 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 WDTC1Q8N5D0 677 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 SLC4A11Q8NBS3 891 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 TMEM35BQ8NCS4 154 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 ARRDC4Q8NCT1 418 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 ACTRT1Q8TDG2 376 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 ALG3Q92685 438 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 KRT35Q92764 455 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 TMEM176AQ96HP8 235 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 FAXDC2Q96IV6 333 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 HEXIM2Q96MH2 286 aaKnown RBP19.98■□□□□ 0.79
CLPB-205ENST00000535477 AP1M1Q9BXS5 423 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 OSBPL7Q9BZF2 842 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 SENP6Q9GZR1 1112 aaPredicted RBP19.98■□□□□ 0.79
CLPB-205ENST00000535477 GJB6O95452 261 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 SLC7A5Q01650 507 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 PTP4A2Q12974 167 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 ITGA7Q13683 1181 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 DENND1BQ6P3S1 775 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 HDAC7Q8WUI4 952 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 RPS6KC1Q96S38 1066 aa19.98■□□□□ 0.79
CLPB-205ENST00000535477 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.98■□□□□ 0.794e-6■■■■□ 22.3
CLPB-205ENST00000535477 TRMT13Q9NUP7 481 aaKnown RBP19.98■□□□□ 0.79
CLPB-205ENST00000535477 RAB21Q9UL25 225 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms