RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 PROSCO94903 275 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 HOXA11P31270 313 aaPredicted RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 PLA2G4AP47712 749 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 GJA9P57773 515 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 FAM193AP78312 1265 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 NKX3-2P78367 333 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 DHX34Q14147 1143 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 WHAMMQ8TF30 809 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 ALG3Q92685 438 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 C11orf70Q9BRQ4 267 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 UBXN6Q9BZV1 441 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
BEST1-208ENST00000534553 MED4Q9NPJ6 270 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 DPP3Q9NY33 737 aa14.25□□□□□ -0.13
BEST1-208ENST00000534553 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 RAD51CO43502 376 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 PSTPIP1O43586 416 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 NPTXRO95502 500 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 WEE2P0C1S8 567 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 ATF7P17544 494 aaPredicted RBP14.24□□□□□ -0.13
BEST1-208ENST00000534553 CHRNA3P32297 505 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 TNNT3P45378 269 aaPredicted RBP14.24□□□□□ -0.13
BEST1-208ENST00000534553 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 MAMLD1Q13495 774 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 STILQ15468 1287 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 PTPROQ16827 1216 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 HSP90B2PQ58FF3 399 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 KLHL7Q8IXQ5 586 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 LRRC52Q8N7C0 313 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 BEST2Q8NFU1 509 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 HDAC7Q8WUI4 952 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 SNX27Q96L92 541 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 OSMRQ99650 979 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 DNAI2Q9GZS0 605 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 MIS12Q9H081 205 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 RAB17Q9H0T7 212 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 EPB41L5Q9HCM4 733 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 WDR35Q9P2L0 1181 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 IP6K2Q9UHH9 426 aa14.24□□□□□ -0.13
BEST1-208ENST00000534553 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.24□□□□□ -0.13
BEST1-208ENST00000534553 FAM187AA6NFU0 413 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 CILPO75339 1184 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 CYBAP13498 195 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 GBP1P32455 592 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 GSCP56915 257 aaPredicted RBP14.23□□□□□ -0.13
BEST1-208ENST00000534553 CBX1P83916 185 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 SLC7A5Q01650 507 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 GUCY2DQ02846 1103 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 SNX17Q15036 470 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 SCARA5Q6ZMJ2 495 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 MMS22LQ6ZRQ5 1243 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 PASD1Q8IV76 773 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 FEZF2Q8TBJ5 459 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 PKNOX2Q96KN3 472 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 AP1M1Q9BXS5 423 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
BEST1-208ENST00000534553 GPBP1L1Q9HC44 474 aaPredicted RBP14.23□□□□□ -0.13
BEST1-208ENST00000534553 CNTN3Q9P232 1028 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 AGAP1Q9UPQ3 857 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 GINS2Q9Y248 185 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 UTP11Q9Y3A2 253 aaKnown RBP14.23□□□□□ -0.13
BEST1-208ENST00000534553 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
BEST1-208ENST00000534553 M0QZ92 97 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 MEFVO15553 781 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 ZMYND10O75800 440 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 CAPN15O75808 1086 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 HMGCRP04035 888 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 GLI1P08151 1106 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 BRD2P25440 801 aaKnown RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 NOGQ13253 232 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 ERICH1Q86X53 443 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 RHOT1Q8IXI2 618 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 C3orf20Q8ND61 904 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 DNAJB3Q8WWF6 145 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 KRT35Q92764 455 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 TMEM176AQ96HP8 235 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 RASAL2Q9UJF2 1139 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 BARX2Q9UMQ3 279 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 UBQLN1Q9UMX0 589 aaKnown RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 TREHO43280 583 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 PHF2O75151 1096 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 CD4P01730 458 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 C6orf222P0C671 652 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 VDRP11473 427 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 CETN2P41208 172 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 PSMC4P43686 418 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 AARSP49588 968 aaKnown RBP eCLIP14.22□□□□□ -0.13
BEST1-208ENST00000534553 PTPN11Q06124 597 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms