RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 RBP5P82980 135 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 PHLDB3Q6NSJ2 640 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 TMEM173Q86WV6 379 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 NEK11Q8NG66 645 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 KAT5Q92993 513 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 TATDN2Q93075 761 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 FAM161BQ96MY7 647 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 ARID3AQ99856 593 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 MRPL9Q9BYD2 267 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 GANQ9H2C0 597 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 FAM207AQ9NSI2 230 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 COL6A3P12111 3177 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 VWA8A3KMH1 1905 aa14.4□□□□□ -0.1
TRAPPC4-214ENST00000533632 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 KIF2AO00139 706 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 KIF4AO95239 1232 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 SLC11A1P49279 550 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 CDK17Q00537 523 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 GOLGA8FQ08AF8 430 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 GOLGA8DPQ0D2H9 430 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 TRPC3Q13507 836 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 ZNF697Q5TEC3 545 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 HASPINQ8TF76 798 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 BCL7CQ8WUZ0 217 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 HPDLQ96IR7 371 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 GUCD1Q96NT3 240 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 POLIQ9UNA4 740 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 C5orf67F2Z3F1 127 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 RFXAPO00287 272 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 LPXNO60711 386 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 RPL9P32969 192 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 LILRA4P59901 499 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 CETN1Q12798 172 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 MEA1Q16626 185 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 ZNF699Q32M78 642 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 KLHDC7AQ5VTJ3 777 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 C17orf53Q8N3J3 647 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 LRRC52Q8N7C0 313 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 VRTNQ9H8Y1 702 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 PLCB1Q9NQ66 1216 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 MARCH5Q9NX47 278 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 MTMR10Q9NXD2 777 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 PRG3Q9Y2Y8 225 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 FHOD1Q9Y613 1164 aa14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-214ENST00000533632 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 NRP1O14786 923 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 GALTP07902 379 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 BMPR1AP36894 532 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 ASPAP45381 313 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 OR1G1P47890 313 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 BCAR1P56945 870 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 RRAGAQ7L523 313 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 DEFB123Q8N688 67 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 ARNTL2Q8WYA1 636 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 UROC1Q96N76 676 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 CEP72Q9P209 647 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 APEX2Q9UBZ4 518 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 FBXL5Q9UKA1 691 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
TRAPPC4-214ENST00000533632 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 I3L4J1 428 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 B3GAT3O94766 335 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 UCHL3P15374 230 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 ATICP31939 592 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 BRCC3P46736 316 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 AARSP49588 968 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 ADGRE1Q14246 886 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 WDR72Q3MJ13 1102 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 COLGALT1Q8NBJ5 622 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 SDCBP2Q9H190 292 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 NXF1Q9UBU9 619 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 CCDC175P0C221 793 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 CTNNB1P35222 781 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 TAF6P49848 677 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 CACNA2D4Q7Z3S7 1137 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 CCDC170Q8IYT3 715 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 PPM1KQ8N3J5 372 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 GDPD5Q8WTR4 605 aa14.37□□□□□ -0.11
TRAPPC4-214ENST00000533632 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms