RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 WSCD1Q658N2 575 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 GAS2L3Q86XJ1 694 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 TAF4BQ92750 862 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 XYLT2Q9H1B5 865 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 MRPL17Q9NRX2 175 aaKnown RBP18.73■□□□□ 0.59
NXF1-216ENST00000533499 LZTS1Q9Y250 596 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 PAX3P23760 479 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 IRS1P35568 1242 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 RAP1GAPP47736 663 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 ARPP19P56211 112 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 FANCCQ00597 558 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 SMC1AQ14683 1233 aaKnown RBP18.72■□□□□ 0.59
NXF1-216ENST00000533499 EXOC3L4Q17RC7 722 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 VARS2Q5ST30 1063 aaKnown RBP18.72■□□□□ 0.59
NXF1-216ENST00000533499 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 TATDN2Q93075 761 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 NT5C1BQ96P26 610 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 ZBP1Q9H171 429 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 STK39Q9UEW8 545 aa18.72■□□□□ 0.59
NXF1-216ENST00000533499 COL4A4P53420 1690 aaPredicted RBP18.72■□□□□ 0.59
NXF1-216ENST00000533499 LGALS16A8MUM7 142 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 M0QZQ0 153 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 SYN3O14994 580 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 CTSAP10619 480 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 RPL17P18621 184 aaKnown RBP18.71■□□□□ 0.59
NXF1-216ENST00000533499 SLC9A1P19634 815 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 FGFR3P22607 806 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 AARSP49588 968 aaKnown RBP eCLIP18.71■□□□□ 0.59
NXF1-216ENST00000533499 YWHAHQ04917 246 aaPredicted RBP18.71■□□□□ 0.59
NXF1-216ENST00000533499 PSMD5Q16401 504 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 CTXN3Q4LDR2 81 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 OVOS1Q6IE37 1185 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 PPM1KQ8N3J5 372 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 PDCL2Q8N4E4 241 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 DEFB123Q8N688 67 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 GAS2L1Q99501 681 aaPredicted RBP18.71■□□□□ 0.59
NXF1-216ENST00000533499 LSM14BQ9BX40 385 aaKnown RBP18.71■□□□□ 0.59
NXF1-216ENST00000533499 NIF3L1Q9GZT8 377 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 APOBEC3GQ9HC16 384 aaKnown RBP18.71■□□□□ 0.59
NXF1-216ENST00000533499 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 DSEQ9UL01 958 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 L1RE1Q9UN81 338 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 COQ4Q9Y3A0 265 aa18.71■□□□□ 0.59
NXF1-216ENST00000533499 VWA8A3KMH1 1905 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 H7C4K7 107 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
NXF1-216ENST00000533499 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 CD58P19256 250 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 FXR1P51114 621 aaKnown RBP eCLIP18.7■□□□□ 0.58
NXF1-216ENST00000533499 CDH8P55286 799 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 UBASH3AP57075 661 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 DSG1Q02413 1049 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 ZNF280DQ6N043 979 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 RRAGAQ7L523 313 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 RBM23Q86U06 439 aaKnown RBP18.7■□□□□ 0.58
NXF1-216ENST00000533499 THEM5Q8N1Q8 247 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 TOP6BLQ8N6T0 577 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 OR6B3Q8NGW1 331 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 MRPL45Q9BRJ2 306 aaKnown RBP18.7■□□□□ 0.58
NXF1-216ENST00000533499 NGRNQ9NPE2 291 aaKnown RBP18.7■□□□□ 0.58
NXF1-216ENST00000533499 IFNKQ9P0W0 207 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 SSX2IPQ9Y2D8 614 aa18.7■□□□□ 0.58
NXF1-216ENST00000533499 HIDE1A8MVS5 230 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 PMM2O15305 246 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 TYMPP19971 482 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 CDR1P51861 262 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 APBA1Q02410 837 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 CAMK1Q14012 370 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 SYCP1Q15431 976 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 SOWAHAQ2M3V2 549 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 KIAA0319Q5VV43 1072 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 ANKS3Q6ZW76 656 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 RNF168Q8IYW5 571 aaPredicted RBP18.69■□□□□ 0.58
NXF1-216ENST00000533499 MYLIPQ8WY64 445 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 MRPL38Q96DV4 380 aaKnown RBP18.69■□□□□ 0.58
NXF1-216ENST00000533499 NAP1L5Q96NT1 182 aaPredicted RBP18.69■□□□□ 0.58
NXF1-216ENST00000533499 VRTNQ9H8Y1 702 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 CHST7Q9NS84 486 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 LAMA3Q16787 3333 aa18.69■□□□□ 0.58
NXF1-216ENST00000533499 CHD9Q3L8U1 2897 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 GTPBP10A4D1E9 387 aaKnown RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 LRRC10BA6NIK2 292 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 TEX33O43247 280 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 EFEMP2O95967 443 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 PDGFRBP09619 1106 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 ACAT1P24752 427 aaKnown RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 PON1P27169 355 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 ASPAP45381 313 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 PDXDC1Q6P996 788 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 TRIM65Q6PJ69 517 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms