RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 HUS1O60921 280 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 PHACTR2O75167 634 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 PAPLNO95428 1278 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 C4BPAP04003 597 aaKnown RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 ERCC5P28715 1186 aaPredicted RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 PMS1P54277 932 aaKnown RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 NLRP12P59046 1061 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 UVSSAQ2YD98 709 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 ZACNQ401N2 412 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 CTXN3Q4LDR2 81 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 LMBRD2Q68DH5 695 aaPredicted RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 OVOS1Q6IE37 1185 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 EP400NLQ6ZTU2 488 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 THEM5Q8N1Q8 247 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 CMASQ8NFW8 434 aaPredicted RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 ZNF461Q8TAF7 563 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 PLEKHO2Q8TD55 490 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 ZNF516Q92618 1163 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 POP1Q99575 1024 aaKnown RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 CLEC1BQ9P126 229 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 ARMCX3Q9UH62 379 aaPredicted RBP22.55■■□□□ 1.2
VPS51-211ENST00000533487 CTNND2Q9UQB3 1225 aa22.55■■□□□ 1.2
VPS51-211ENST00000533487 REV3LO60673 3130 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 TRIM49BA6NDI0 452 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 LINC01565O15544 149 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 SMARCB1Q12824 385 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 SMAD4Q13485 552 aaKnown RBP22.54■■□□□ 1.2
VPS51-211ENST00000533487 BIRC3Q13489 604 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 C15orf39Q6ZRI6 1047 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 SMRP1Q8NCR6 262 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 VN1R2Q8NFZ6 395 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 ASB2Q96Q27 587 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 SFXN1Q9H9B4 322 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 ZDHHC7Q9NXF8 308 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 FBXL5Q9UKA1 691 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 CDY1Q9Y6F8 540 aa22.54■■□□□ 1.2
VPS51-211ENST00000533487 TGM5O43548 720 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
VPS51-211ENST00000533487 OR1D2P34982 312 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 LHX1P48742 406 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 SGSM1Q2NKQ1 1148 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 CES5AQ6NT32 575 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 FAXDC2Q96IV6 333 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 DUSP9Q99956 384 aaKnown RBP22.53■■□□□ 1.2
VPS51-211ENST00000533487 TMEM8AQ9HCN3 771 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
VPS51-211ENST00000533487 ABLIM3O94929 683 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 POU2F2P09086 479 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 P4HA1P13674 534 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 EPCAMP16422 314 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 HOXA9P31269 272 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 MARSP56192 900 aaKnown RBP22.52■■□□□ 1.2
VPS51-211ENST00000533487 NCOA4Q13772 614 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 TDRD10Q5VZ19 366 aaKnown RBP22.52■■□□□ 1.2
VPS51-211ENST00000533487 KRT39Q6A163 491 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 LLGL2Q6P1M3 1020 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 CCDC149Q6ZUS6 474 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 SV2AQ7L0J3 742 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 LIMS2Q7Z4I7 341 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 NECTIN4Q96NY8 510 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 IMPG2Q9BZV3 1241 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 MAN1C1Q9NR34 630 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 HSFX1Q9UBD0 423 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 BARX2Q9UMQ3 279 aaPredicted RBP22.52■■□□□ 1.2
VPS51-211ENST00000533487 SNX9Q9Y5X1 595 aa22.52■■□□□ 1.2
VPS51-211ENST00000533487 HNRNPA1P09651 372 aaKnown RBP eCLIP22.51■■□□□ 1.19
VPS51-211ENST00000533487 ATF2P15336 505 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 RPL17P18621 184 aaKnown RBP22.51■■□□□ 1.19
VPS51-211ENST00000533487 DLG4P78352 724 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 ROR1Q01973 937 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 DLX2Q07687 328 aaPredicted RBP22.51■■□□□ 1.19
VPS51-211ENST00000533487 TJAP1Q5JTD0 557 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 C1orf220Q5T0J3 134 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 LIN9Q5TKA1 542 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 SASS6Q6UVJ0 657 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 PALB2Q86YC2 1186 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 KREMEN2Q8NCW0 462 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 CCDC150Q8NCX0 1101 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 ADAM7Q9H2U9 754 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 PRDM6Q9NQX0 595 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 AFF4Q9UHB7 1163 aaKnown RBP22.51■■□□□ 1.19
VPS51-211ENST00000533487 EYSQ5T1H1 3165 aa22.51■■□□□ 1.19
VPS51-211ENST00000533487 SPDYE4A6NLX3 237 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 PMM2O15305 246 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 N4BP1O75113 896 aaKnown RBP22.5■■□□□ 1.19
VPS51-211ENST00000533487 TACC1O75410 805 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 LETM1O95202 739 aaPredicted RBP22.5■■□□□ 1.19
VPS51-211ENST00000533487 CST3P01034 146 aaPredicted RBP22.5■■□□□ 1.19
VPS51-211ENST00000533487 CCDC192P0DO97 292 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 TNNC1P63316 161 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 MYL7Q01449 175 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 GPR17Q13304 367 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 KLHL40Q2TBA0 621 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 CCDC40Q4G0X9 1142 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 SYCE2Q6PIF2 218 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 TMEM130Q8N3G9 435 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.5■■□□□ 1.19
VPS51-211ENST00000533487 C2orf15Q8WU43 125 aaKnown RBP22.5■■□□□ 1.19
VPS51-211ENST00000533487 RIPOR3Q96MK2 946 aa22.5■■□□□ 1.19
VPS51-211ENST00000533487 ACBD6Q9BR61 282 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms