RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZNF461Q8TAF7 563 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 GTPBP4Q9BZE4 634 aaKnown RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 SPDYE4A6NLX3 237 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 TNNC2P02585 160 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 CASP4P49662 377 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 CLDN10P78369 228 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 RBP5P82980 135 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 OVOS1Q6IE37 1185 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 PARD3BQ8TEW8 1205 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 CCDC127Q96BQ5 260 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 FNBP1Q96RU3 617 aa22.05■■□□□ 1.12
CCS-208ENST00000533244 OR6C75A6NL08 312 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 CYB561D2O14569 222 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 MAPK13O15264 365 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 C8AP07357 584 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 POU2F2P09086 479 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 HNRNPA1P09651 372 aaKnown RBP eCLIP22.04■■□□□ 1.12
CCS-208ENST00000533244 DLATP10515 647 aaKnown RBP22.04■■□□□ 1.12
CCS-208ENST00000533244 ATF2P15336 505 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 PRCPP42785 496 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 UVSSAQ2YD98 709 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 LIN9Q5TKA1 542 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 TPGS2Q68CL5 300 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 TRAPPC11Q7Z392 1133 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 USP37Q86T82 979 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 ZNF516Q92618 1163 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 PRKD2Q9BZL6 878 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 GDAP2Q9NXN4 497 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 DSEQ9UL01 958 aa22.04■■□□□ 1.12
CCS-208ENST00000533244 TNNI1P19237 187 aa22.03■■□□□ 1.12
CCS-208ENST00000533244 NR2F2P24468 414 aa22.03■■□□□ 1.12
CCS-208ENST00000533244 EDRF1Q3B7T1 1238 aa22.03■■□□□ 1.12
CCS-208ENST00000533244 CENPPQ6IPU0 288 aa22.03■■□□□ 1.12
CCS-208ENST00000533244 MAN1B1Q9UKM7 699 aa22.03■■□□□ 1.12
CCS-208ENST00000533244 LRRIQ3A6PVS8 624 aaPredicted RBP22.02■■□□□ 1.12
CCS-208ENST00000533244 TULP1O00294 542 aaPredicted RBP22.02■■□□□ 1.12
CCS-208ENST00000533244 KRT19P08727 400 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 TCEAL8Q8IYN2 117 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 SLC7A14Q8TBB6 771 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 SMG7Q92540 1137 aaKnown RBP22.02■■□□□ 1.12
CCS-208ENST00000533244 RTP3Q9BQQ7 232 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 AFF4Q9UHB7 1163 aaKnown RBP22.02■■□□□ 1.12
CCS-208ENST00000533244 MAFFQ9ULX9 164 aa22.02■■□□□ 1.12
CCS-208ENST00000533244 AKAP3O75969 853 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 ARPP19P56211 112 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 MCCD1P59942 119 aaPredicted RBP22.01■■□□□ 1.11
CCS-208ENST00000533244 BFSP1Q12934 665 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 PPM1LQ5SGD2 360 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 WSCD1Q658N2 575 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 CCDC149Q6ZUS6 474 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 LIMS2Q7Z4I7 341 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 OR10T2Q8NGX3 314 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 TMC2Q8TDI7 906 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 WDR6Q9NNW5 1121 aaKnown RBP22.01■■□□□ 1.11
CCS-208ENST00000533244 L1RE1Q9UN81 338 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 FRMD4BQ9Y2L6 1034 aa22.01■■□□□ 1.11
CCS-208ENST00000533244 VNN2O95498 520 aa22■■□□□ 1.11
CCS-208ENST00000533244 CPB1P15086 417 aa22■■□□□ 1.11
CCS-208ENST00000533244 BMP6P22004 513 aa22■■□□□ 1.11
CCS-208ENST00000533244 RPL13P26373 211 aaKnown RBP22■■□□□ 1.11
CCS-208ENST00000533244 SSTR3P32745 418 aaPredicted RBP22■■□□□ 1.11
CCS-208ENST00000533244 AP3M2P53677 418 aa22■■□□□ 1.11
CCS-208ENST00000533244 ENPEPQ07075 957 aa22■■□□□ 1.11
CCS-208ENST00000533244 GPR17Q13304 367 aa22■■□□□ 1.11
CCS-208ENST00000533244 CEP135Q66GS9 1140 aa22■■□□□ 1.11
CCS-208ENST00000533244 METTL23Q86XA0 190 aa22■■□□□ 1.11
CCS-208ENST00000533244 ZC3H3Q8IXZ2 948 aaKnown RBP22■■□□□ 1.11
CCS-208ENST00000533244 SPATA18Q8TC71 538 aa22■■□□□ 1.11
CCS-208ENST00000533244 RPGRIP1Q96KN7 1286 aa22■■□□□ 1.11
CCS-208ENST00000533244 USTQ9Y2C2 406 aa22■■□□□ 1.11
CCS-208ENST00000533244 SEC24AO95486 1093 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 STAU1O95793 577 aaKnown RBP21.99■■□□□ 1.11
CCS-208ENST00000533244 CST3P01034 146 aaPredicted RBP21.99■■□□□ 1.11
CCS-208ENST00000533244 OR4Q2P0C623 313 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 DLG4P78352 724 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 MYO1EQ12965 1108 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 ADAM9Q13443 819 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 MORC3Q14149 939 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 C1orf220Q5T0J3 134 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 RNF19BQ6ZMZ0 732 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 TMEM86AQ8N2M4 240 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 PDCL2Q8N4E4 241 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 TOP6BLQ8N6T0 577 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 KHSRPQ92945 711 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCS-208ENST00000533244 HPDLQ96IR7 371 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 TMEM209Q96SK2 561 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 ZCWPW1Q9H0M4 648 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 NR2E1Q9Y466 385 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 CLUHO75153 1309 aa21.99■■□□□ 1.11
CCS-208ENST00000533244 C4BPAP04003 597 aaKnown RBP21.98■■□□□ 1.11
CCS-208ENST00000533244 DPH6Q7L8W6 267 aa21.98■■□□□ 1.11
CCS-208ENST00000533244 MKNK1Q9BUB5 465 aa21.98■■□□□ 1.11
CCS-208ENST00000533244 R3HCC1Q9Y3T6 440 aaKnown RBP21.98■■□□□ 1.11
CCS-208ENST00000533244 SNX9Q9Y5X1 595 aa21.98■■□□□ 1.11
CCS-208ENST00000533244 C2CD4DB7Z1M9 353 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 IKBKBO14920 756 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 HUS1O60921 280 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 CD44P16070 742 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms