RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 FAM49BQ9NUQ9 324 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 AIPL1Q9NZN9 384 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SENP1Q9P0U3 644 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 KIF1CO43896 1103 aaKnown RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ADCY3O60266 1144 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ITGB3P05106 788 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 NCAM1P13591 858 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ADORA2AP29274 412 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 RGS4P49798 205 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 TWF1Q12792 350 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SPARCL1Q14515 664 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 MFSD10Q14728 455 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 RBBP7Q16576 425 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 OTUB1Q96FW1 271 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SNF8Q96H20 258 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 KIFC3Q9BVG8 833 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 CINPQ9BW66 212 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 COG4Q9H9E3 785 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 FGFR1OP2Q9NVK5 253 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 FBXO21O94952 628 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 VCLP18206 1134 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 GPD1P21695 349 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ERVK-9P63128 1117 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ERVK-24P63145 666 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 IKBKEQ14164 716 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 STARD3Q14849 445 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 MTBPQ96DY7 904 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 FAM129AQ9BZQ8 928 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 GPRC5DQ9NZD1 345 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SERPINI2O75830 405 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ALDH1A2O94788 518 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ACADMP11310 421 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SYT2Q8N9I0 419 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 NCLNQ969V3 563 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 HINFPQ9BQA5 517 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 L3MBTL1Q9Y468 752 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 ACSL3O95573 720 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PYGLP06737 847 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 NPEPPSP55786 919 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 TRADDQ15628 312 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 ICE2Q659A1 982 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 CASS4Q9NQ75 786 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 DNAJC17Q9NVM6 304 aaKnown RBP11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PACSIN2Q9UNF0 486 aaPredicted RBP11.24□□□□□ -0.61
COLCA1-203ENST00000532918 CYB561D2O14569 222 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 MYBP10242 640 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SLCO1A2P46721 670 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 CREMQ03060 361 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 ADCK2Q7Z695 626 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 KLK14Q9P0G3 267 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 DDTLA6NHG4 134 aaPredicted RBP11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SLC15A5A6NIM6 579 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 AP1G2O75843 785 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 KLRC2P26717 231 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 OXCT1P55809 520 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
COLCA1-203ENST00000532918 GRIK4Q16099 956 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 KIZQ2M2Z5 673 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PPM1NQ8N819 430 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 GPR63Q9BZJ6 419 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 FBXL21Q9UKT6 434 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SNX24Q9Y343 169 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 PYGBP11216 843 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 GTF2H1P32780 548 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 ATP6V1E1P36543 226 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 CLCN3P51790 818 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 NEK2P51955 445 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 FSCN1Q16658 493 aaKnown RBP11.24□□□□□ -0.61
COLCA1-203ENST00000532918 Q4G0T1 1027 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 CCDC138Q96M89 665 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 MRIQ9BWK5 157 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
COLCA1-203ENST00000532918 SMAPO00193 183 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 VWA5AO00534 786 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ATP9BO43861 1147 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ZNF500O60304 480 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ACVR2BQ13705 512 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ACBD5Q5T8D3 534 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms