RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SCP2P22307 547 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 NUDT2P50583 147 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 USP10Q14694 798 aaKnown RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ERMARDQ5T6L9 678 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 PADI6Q6TGC4 694 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 PALB2Q86YC2 1186 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ARHGEF19Q8IW93 802 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 TGFBRAP1Q8WUH2 860 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 EEF1AKMT1Q8WVE0 214 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 LPIN2Q92539 896 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CENPIQ92674 756 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 TNIP3Q96KP6 325 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CEP170P1Q96L14 293 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF577Q9BSK1 485 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 DCLRE1BQ9H816 532 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CD248Q9HCU0 757 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 LATS2Q9NRM7 1088 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ARHGEF38Q9NXL2 777 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 TRPM5Q9NZQ8 1165 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 SPASTQ9UBP0 616 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 SLC9A2Q9UBY0 812 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CARD8Q9Y2G2 431 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 HECW1Q76N89 1606 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ATP9BO43861 1147 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 DGKIO75912 1065 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 EPB42P16452 691 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 NPR3P17342 541 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 MSH3P20585 1137 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ITGA6P23229 1130 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 GTF2H1P32780 548 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 PEX5P50542 639 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 IL5RAQ01344 420 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 FAPQ12884 760 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 HIST2H2ACQ16777 129 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 HIST2H2AA3Q6FI13 130 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 C11orf57Q6ZUT1 292 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CHSY1Q86X52 802 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 KCTD17Q8N5Z5 321 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF671Q8TAW3 534 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 JADE3Q92613 823 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 ACAD9Q9H845 621 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 NMRK1Q9NWW6 199 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CD274Q9NZQ7 290 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 MLXQ9UH92 298 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 CIDEBQ9UHD4 219 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 EIF3LQ9Y262 564 aaKnown RBP8.47□□□□□ -1.05
CTNND1-231ENST00000532463 COQ6Q9Y2Z9 468 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 TPRKBQ9Y3C4 175 aa8.47□□□□□ -1.05
CTNND1-231ENST00000532463 LAMC3Q9Y6N6 1575 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 LOC100653049A0A140TA62 436 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 FAM220BPB1ANY3 271 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 FAM47E-STBD1D6RA91 191 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 FKBP6O75344 327 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 KRT34O76011 436 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 S100A2P29034 98 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 SFNP31947 248 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 TUBA4AP68366 448 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 DNAJC3Q13217 504 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 TNFAIP1Q13829 316 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 PHKG1Q16816 387 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 C1orf189Q5VU69 101 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 CACHD1Q5VU97 1274 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 LRRC6Q86X45 466 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 SAMD3Q8N6K7 520 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF564Q8TBZ8 553 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-231ENST00000532463 VMP1Q96GC9 406 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 CDHR1Q96JP9 859 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 NEK6Q9HC98 313 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 ENTPD7Q9NQZ7 604 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF222Q9UK12 451 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 ARHGEF11O15085 1522 aa8.46□□□□□ -1.05
CTNND1-231ENST00000532463 PSMD12O00232 456 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-231ENST00000532463 SPAG6O75602 509 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 THRAP10827 490 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 S100GP29377 79 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 OCLNQ16625 522 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ANKRD40Q6AI12 368 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ERAP2Q6P179 960 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ZBTB49Q6ZSB9 765 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 PID1Q7Z2X4 250 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 CDK20Q8IZL9 346 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ATG16L2Q8NAA4 619 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 SETD9Q8NE22 299 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 AP5M1Q9H0R1 490 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 SAMSN1Q9NSI8 373 aaKnown RBP8.46□□□□□ -1.06
CTNND1-231ENST00000532463 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 CRNNQ9UBG3 495 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-231ENST00000532463 PCDHB8Q9UN66 801 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 TNPO2O14787 897 aaKnown RBP8.46□□□□□ -1.06
CTNND1-231ENST00000532463 PSAPP07602 524 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ZNF24P17028 368 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 PAICSP22234 425 aaKnown RBP8.46□□□□□ -1.06
CTNND1-231ENST00000532463 CYP51A1Q16850 503 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ACCSLQ4AC99 568 aa8.46□□□□□ -1.06
CTNND1-231ENST00000532463 ZBTB33Q86T24 672 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms