RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 MARCH8Q5T0T0 291 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 LRRC38Q5VT99 294 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 SYDE1Q6ZW31 735 aaPredicted RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 ARHGEF26Q96DR7 871 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 PI4K2AQ9BTU6 479 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 OSGEPQ9NPF4 335 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 TAS2R14Q9NYV8 317 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 ADAM22Q9P0K1 906 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 UTP11Q9Y3A2 253 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHD7-211ENST00000532149 TSPAN1O60635 241 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 HMGCRP04035 888 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 SMIM10L2AP0DMW4 78 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 SMIM10L2BP0DMW5 78 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 MMP8P22894 467 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 HOXC8P31273 242 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHD7-211ENST00000532149 PSEN2P49810 448 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 COPS2P61201 443 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 ADAM17P78536 824 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 CASP8Q14790 479 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 MREGQ8N565 214 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 TRAPPC12Q8WVT3 735 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 CD101Q93033 1021 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 LRRC45Q96CN5 670 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 RNPC3Q96LT9 517 aaKnown RBP13.07□□□□□ -0.32
CHD7-211ENST00000532149 XYLT2Q9H1B5 865 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 APOBEC3GQ9HC16 384 aaKnown RBP13.07□□□□□ -0.32
CHD7-211ENST00000532149 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
CHD7-211ENST00000532149 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 C17orf102A2RUQ5 167 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 LACTBL1A8MY62 500 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 M0QZ92 97 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 GPR25O00155 361 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 SART1O43290 800 aaKnown RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 OPA1O60313 960 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 PROSCO94903 275 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 EDN1P05305 212 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 ZNF286BP0CG31 522 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 VDRP11473 427 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CYP2C9P11712 490 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 DARSP14868 501 aaKnown RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 CYP3A5P20815 502 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 COMTP21964 271 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 TNFSF9P41273 254 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 FNTAP49354 379 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 PEX5P50542 639 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 GJA9P57773 515 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 MYL6P60660 151 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 FOXK1P85037 733 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 LMNB2Q03252 620 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 MTMR3Q13615 1198 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 PIGHQ14442 188 aaPredicted RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 SMC1AQ14683 1233 aaKnown RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 MESDQ14696 234 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 ZBTB41Q5SVQ8 909 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CEP128Q6ZU80 1094 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CATSPER4Q7RTX7 472 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 UNC93AQ86WB7 457 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 FAM71BQ8TC56 605 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 FNIP1Q8TF40 1166 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 AENQ8WTP8 325 aaKnown RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
CHD7-211ENST00000532149 UBXN6Q9BZV1 441 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 CHST12Q9NRB3 414 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 PCYOX1Q9UHG3 505 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 COG5Q9UP83 839 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 PTPRJQ12913 1337 aa13.06□□□□□ -0.32
CHD7-211ENST00000532149 GPR32O75388 356 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 HEXIM1O94992 359 aaKnown RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 GNRH1P01148 92 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 FGGP02679 453 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 VTNP04004 478 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 SETSIPP0DME0 302 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 CXCL8P10145 99 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 HOXD10P28358 340 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 LSM11P83369 360 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHD7-211ENST00000532149 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms