RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, human

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-219	ENST00000531657	RAB17	Q9H0T7	212 aa		10.13	□□□□□ -0.79
PPFIA1-219	ENST00000531657	DHX33	Q9H6R0	707 aa	Known RBP	10.13	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SNTG2	Q9NY99	539 aa		10.13	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ANAPC5	Q9UJX4	755 aa		10.13	□□□□□ -0.79
PPFIA1-219	ENST00000531657	KAT6A	Q92794	2004 aa		10.13	□□□□□ -0.79
PPFIA1-219	ENST00000531657		I3L4J1	428 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	STAM2	O75886	525 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MYL3	P08590	195 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	LCP1	P13796	627 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	NAMPT	P43490	491 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	IRX4	P78413	519 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TTLL4	Q14679	1199 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	RFX6	Q8HWS3	928 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SLC9A9	Q8IVB4	645 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	IQCK	Q8N0W5	287 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SAMD3	Q8N6K7	520 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MFSD14A	Q96MC6	490 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PGLYRP2	Q96PD5	576 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PRMT1	Q99873	361 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TRIM56	Q9BRZ2	755 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	OSBPL8	Q9BZF1	889 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CDT1	Q9H211	546 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	RRAGC	Q9HB90	399 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SAYSD1	Q9NPB0	183 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MTRF1L	Q9UGC7	380 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657		A0A0B4J269	797 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	GOLGA8K	D6RF30	607 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PHF2	O75151	1096 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TOM1L1	O75674	476 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	KIAA0754	O94854	1291 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TUBB	P07437	444 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MAMLD1	Q13495	774 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ALCAM	Q13740	583 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	FAM133B	Q5BKY9	247 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ZNF662	Q6ZS27	426 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	STKLD1	Q8NE28	680 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CHST13	Q8NET6	341 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ADAM32	Q8TC27	787 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	DDX1	Q92499	740 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ANKRD36BP1	Q96IX9	119 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CARD9	Q9H257	536 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	UBE4B	O95155	1302 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	LRRC37A	A6NMS7	1700 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	GOLGA6L7	A0A1B0GV03	622 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657		H3BRB1	525 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	KIAA0391	O15091	583 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	GH1	P01241	217 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	OSBP	P22059	807 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ARSE	P51690	589 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PTEN	P60484	403 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MAP3K10	Q02779	954 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	BBS9	Q3SYG4	887 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	NIPA1	Q7RTP0	329 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	RIOX2	Q8IUF8	465 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	WHAMM	Q8TF30	809 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ELAC2	Q9BQ52	826 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TUT1	Q9H6E5	874 aa	Known RBP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	RNF14	Q9UBS8	474 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	FAM169A	Q9Y6X4	670 aa		10.12	□□□□□ -0.79
PPFIA1-219	ENST00000531657	BTBD19	C9JJ37	291 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	MSC	O60682	206 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	LGALS2	P05162	132 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TUBB4B	P68371	445 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	EML3	Q32P44	896 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CELF3	Q5SZQ8	465 aa	Known RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ZNF618	Q5T7W0	954 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	IZUMO3	Q5VZ72	239 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ARMC9	Q7Z3E5	817 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CCDC13	Q8IYE1	715 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	DNAJB3	Q8WWF6	145 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CPXM1	Q96SM3	734 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	EIF2A	Q9BY44	585 aa	Known RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	TMPRSS4	Q9NRS4	437 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SEPT10	Q9P0V9	454 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PIN4	Q9Y237	131 aa	Known RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CEP83	Q9Y592	693 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CAPN7	Q9Y6W3	813 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	C5orf42	Q9H799	3197 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CCDC188	H7C350	402 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	GRIN3B	O60391	1043 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CHN1	P15882	459 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ARF4	P18085	180 aa	Predicted RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	KRT15	P19012	456 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PEX5	P50542	639 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	PSMD6	Q15008	389 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ZBED8	Q8IZ13	594 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ABRA	Q8N0Z2	381 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	KCTD6	Q8NC69	237 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	OR6J1	Q8NGC5	347 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CFAP57	Q96MR6	1250 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	NAP1L3	Q99457	506 aa	Predicted RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ACO2	Q99798	780 aa	Known RBP	10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SYT11	Q9BT88	431 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	SDCBP2	Q9H190	292 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	CYTH4	Q9UIA0	394 aa		10.11	□□□□□ -0.79
PPFIA1-219	ENST00000531657	ZNF112	Q9UJU3	913 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms