RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CYP3A5P20815 502 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 CCNE1P24864 410 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 CDR1P51861 262 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 OVOS1Q6IE37 1185 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 GPBP1Q86WP2 473 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 KCTD17Q8N5Z5 321 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 FAM212AQ96EL1 285 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 BORCS6Q96GS4 357 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 RPF1Q9H9Y2 349 aaKnown RBP20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 TRPV5Q9NQA5 729 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 TBX20Q9UMR3 447 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 OR6C75A6NL08 312 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 H0YCG3 227 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 H3BQV1 296 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 GJB2P29033 226 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 EPHB3P54753 998 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 GPR17Q13304 367 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 JADE1Q6IE81 842 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 CENPPQ6IPU0 288 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 MYCT1Q8N699 235 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 ATAD1Q8NBU5 361 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 ODF2LQ9ULJ1 636 aa20.01■□□□□ 0.79
SSSCA1-206ENST00000531405 MTMR11A4FU01 709 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 OGTO15294 1046 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 CD2BP2O95400 341 aaKnown RBP20■□□□□ 0.79
SSSCA1-206ENST00000531405 SOX9P48436 509 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 PLD1Q13393 1074 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 LPAL2Q16609 132 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 SLC39A4Q6P5W5 647 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 TMX3Q96JJ7 454 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 SENP8Q96LD8 212 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 MSTO1Q9BUK6 570 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 OXCT2Q9BYC2 517 aaPredicted RBP20■□□□□ 0.79
SSSCA1-206ENST00000531405 SPAG17Q6Q759 2223 aa20■□□□□ 0.79
SSSCA1-206ENST00000531405 A0A0B4J269 797 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 SLC38A8A6NNN8 435 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 XPOTO43592 962 aaKnown RBP19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 FAM13AO94988 1023 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 PIGRP01833 764 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 ADRB2P07550 413 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 NFICP08651 508 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 CHRNB1P11230 501 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 TYMPP19971 482 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 ALDH1A3P47895 512 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 LILRA4P59901 499 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 SATB1Q01826 763 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 GAS6Q14393 721 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 MCM6Q14566 821 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 RABEP1Q15276 862 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 KYAT1Q16773 422 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 SPATA1Q5VX52 437 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 GAREM2Q75VX8 874 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 YAF2Q8IY57 180 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 TTC8Q8TAM2 541 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 CSGALNACT1Q8TDX6 532 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 KCNN1Q92952 543 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 SECISBP2LQ93073 1101 aaKnown RBP19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 MKNK1Q9BUB5 465 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 FAM126AQ9BYI3 521 aaPredicted RBP19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 GPR88Q9GZN0 384 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 ZHX3Q9H4I2 956 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 BLOC1S4Q9NUP1 217 aa19.99■□□□□ 0.79
SSSCA1-206ENST00000531405 TISP43B9A030 160 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 ODC1P11926 461 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 NMT1P30419 496 aaKnown RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 CCR3P51677 355 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 ZNF131P52739 623 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 GRIN1Q05586 938 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 MYBPC2Q14324 1141 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 WDR44Q5JSH3 913 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 C9orf57Q5W0N0 161 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 DNAJB7Q7Z6W7 309 aaPredicted RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 ARID3BQ8IVW6 561 aaPredicted RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 OR10T2Q8NGX3 314 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 CALML4Q96GE6 196 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 ZFYVE19Q96K21 471 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 AK8Q96MA6 479 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 LRRC3BQ96PB8 259 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 PARVGQ9HBI0 331 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 PARD6AQ9NPB6 346 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 RBM12Q9NTZ6 932 aaKnown RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 CPSF3Q9UKF6 684 aaKnown RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 USP18Q9UMW8 372 aa19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.98■□□□□ 0.79
SSSCA1-206ENST00000531405 EML5Q05BV3 1969 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 SDK1Q7Z5N4 2213 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 ANKRD63C9JTQ0 380 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 CHADO15335 359 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 TRAK2O60296 914 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 KRT18P05783 430 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 PLCG1P19174 1290 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 TGM1P22735 817 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 GABRR2P28476 465 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 UBA7P41226 1012 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 ACOT2P49753 483 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 KPNA1P52294 538 aaPredicted RBP19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 NRLP54845 237 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 FCHO2Q0JRZ9 810 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms