RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PLEKHA8Q96JA3 519 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 UNKQ9C0B0 810 aaKnown RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PCDHA4Q9UN74 947 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ZMYM2Q9UBW7 1377 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 NEURL1BA8MQ27 555 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 KMOO15229 486 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 SULT1C4O75897 302 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ZBTB11O95625 1053 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 EIF2S1P05198 315 aaKnown RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 FDFT1P37268 417 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PPP1R2P41236 205 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 CPA2P48052 419 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 NCKAP1LP55160 1127 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PDE4DQ08499 809 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ATP1A4Q13733 1029 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 GCKRQ14397 625 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PSMD6Q15008 389 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ASIC2Q16515 512 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 CRY1Q16526 586 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PPP1R2P3Q6NXS1 205 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 USP43Q70EL4 1123 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PRUNE1Q86TP1 453 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ZDHHC14Q8IZN3 488 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PRELID2Q8N945 189 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 KIAA0895Q8NCT3 520 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 SHKBP1Q8TBC3 707 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 CCDC110Q8TBZ0 833 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 XAGE3Q8WTP9 111 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PYDC1Q8WXC3 89 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 MAML1Q92585 1016 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 APPBP2Q92624 585 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 RANBP9Q96S59 729 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 MKNK1Q9BUB5 465 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 OSBPL8Q9BZF1 889 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 CCSER1Q9C0I3 900 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ARPP21Q9UBL0 812 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-219ENST00000531050 PCYOX1Q9UHG3 505 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 NENFQ9UMX5 172 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 ERVK-11Q9UQG0 969 aa8.2□□□□□ -1.1
PTPRK-219ENST00000531050 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 B2RBV5 119 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PODXLO00592 558 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 FOXD2O60548 495 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 DNAJA2O60884 412 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 GUCY1B2O75343 617 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MTRF1O75570 445 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PRDM1O75626 825 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TTC4O95801 387 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 KRT13P13646 458 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 CHKAP35790 457 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 LONP1P36776 959 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 HSPA2P54652 639 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 NUP107P57740 925 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 GK3PQ14409 553 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RASA2Q15283 850 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 C1orf146Q5VVC0 180 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 LRP10Q7Z4F1 713 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ITIH5Q86UX2 942 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 SYCE1Q8N0S2 351 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PPM1KQ8N3J5 372 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 C4orf32Q8N8J7 132 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PCYOX1LQ8NBM8 494 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF75CPQ92670 426 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TMIGD2Q96BF3 282 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MTBPQ96DY7 904 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 SGF29Q96ES7 293 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 GCNAQ96QF7 691 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PLIN2Q99541 437 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 KLC2Q9H0B6 622 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 SNX25Q9H3E2 840 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PIH1D3Q9NQM4 214 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 AMFRQ9UKV5 643 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 LRP6O75581 1613 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 A0A0A6YYK5 440 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RSPH10B2B2RC85 870 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PRPF4O43172 522 aaKnown RBP eCLIP8.19□□□□□ -1.16e-7■□□□□ 9.8
PTPRK-219ENST00000531050 ZBED4O75132 1171 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 IDH1O75874 414 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 BBOX1O75936 387 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TNFAIP8O95379 198 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 S100BP04271 92 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RSPH10BP0C881 870 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 CHRNB2P17787 502 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PRKACBP22694 351 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 CHRNA3P32297 505 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MCM7P33993 719 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PCYT1AP49585 367 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 AP3M2P53677 418 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 OVGP1Q12889 678 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms