RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 DDX4Q9NQI0 724 aaKnown RBP8.18□□□□□ -1.1
SVIP-204ENST00000530199 RIC8BQ9NVN3 520 aa8.18□□□□□ -1.1
SVIP-204ENST00000530199 DLL3Q9NYJ7 618 aa8.18□□□□□ -1.1
SVIP-204ENST00000530199 IP6K2Q9UHH9 426 aa8.18□□□□□ -1.1
SVIP-204ENST00000530199 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
SVIP-204ENST00000530199 MROH5Q6ZUA9 1318 aa8.18□□□□□ -1.1
SVIP-204ENST00000530199 TCRBV5S2A0A599 114 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 LCHNA4D1U4 455 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 H3BQ06 376 aaPredicted RBP8.17□□□□□ -1.1
SVIP-204ENST00000530199 KDM1AO60341 852 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 SNUPNO95149 360 aaKnown RBP8.17□□□□□ -1.1
SVIP-204ENST00000530199 DBHP09172 617 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 RAC2P15153 192 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 ITGB7P26010 798 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 PRDX5P30044 214 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 ARL4AP40617 200 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 GPR3P46089 330 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 FNTBP49356 437 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 ZXDAP98168 799 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 EPHA7Q15375 998 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 KCNA10Q16322 511 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 C14orf80Q86SX3 495 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 TCEAL8Q8IYN2 117 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 SHCBP1Q8NEM2 672 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 PABPC5Q96DU9 382 aaKnown RBP8.17□□□□□ -1.1
SVIP-204ENST00000530199 C12orf42Q96LP6 360 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 WNT8AQ9H1J5 351 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 RXFP1Q9HBX9 757 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 TNFRSF12AQ9NP84 129 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 MBNL3Q9NUK0 354 aaKnown RBP8.17□□□□□ -1.1
SVIP-204ENST00000530199 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
SVIP-204ENST00000530199 SYNRGQ9UMZ2 1314 aa8.17□□□□□ -1.1
SVIP-204ENST00000530199 ASPMQ8IZT6 3477 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 A0A1B0GUL7 405 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 CYBBP04839 570 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 RECQLP46063 649 aaPredicted RBP8.16□□□□□ -1.1
SVIP-204ENST00000530199 GALK1P51570 392 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 SIGLEC14Q08ET2 396 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 HERC6Q8IVU3 1022 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 SIRT2Q8IXJ6 389 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 PCSK9Q8NBP7 692 aaKnown RBP8.16□□□□□ -1.1
SVIP-204ENST00000530199 TTC8Q8TAM2 541 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 GDPD5Q8WTR4 605 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 PEX11GQ96HA9 241 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 SALL1Q9NSC2 1324 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 MKS1Q9NXB0 559 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 HERC5Q9UII4 1024 aaKnown RBP8.16□□□□□ -1.1
SVIP-204ENST00000530199 NUDT5Q9UKK9 219 aa8.16□□□□□ -1.1
SVIP-204ENST00000530199 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
SVIP-204ENST00000530199 ACOT7O00154 380 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 FOXP2O15409 715 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA12O60330 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 H2AFYO75367 372 aaKnown RBP8.15□□□□□ -1.1
SVIP-204ENST00000530199 MAP4K4O95819 1239 aaPredicted RBP8.15□□□□□ -1.1
SVIP-204ENST00000530199 ASGR1P07306 291 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 TMEM253P0C7T8 217 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
SVIP-204ENST00000530199 CCL23P55773 120 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 ODF1Q14990 250 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 CCDC30Q5VVM6 783 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PAQR3Q6TCH7 311 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 LMBR1LQ6UX01 489 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 CCDC146Q8IYE0 955 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 CPA6Q8N4T0 437 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 LINS1Q8NG48 757 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 SEZ6LQ9BYH1 1024 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 USP36Q9P275 1121 aaKnown RBP8.15□□□□□ -1.1
SVIP-204ENST00000530199 CTNND2Q9UQB3 1225 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA9Q9Y5G4 932 aaKnown RBP8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA8Q9Y5G5 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA7Q9Y5G6 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA6Q9Y5G7 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA3Q9Y5H0 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 PCDHGA2Q9Y5H1 932 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
SVIP-204ENST00000530199 EP300Q09472 2414 aaPredicted RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 ZC3H12DA2A288 527 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 PRAMEF25A6NGN4 478 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 PRPF3O43395 683 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 DUSP11O75319 330 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 PDE8BO95263 885 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 ACTN1P12814 892 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 GNALP38405 381 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 GRIN1Q05586 938 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 ADCY1Q08828 1119 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 PICALMQ13492 652 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 MLC1Q15049 377 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 FRMD5Q7Z6J6 570 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 AMOTL1Q8IY63 956 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 MAGEB6Q8N7X4 407 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms