RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 IGSF9Q9P2J2 1179 aa9.81□□□□□ -0.84
CMTM1-210ENST00000528441 DSEQ9UL01 958 aa9.81□□□□□ -0.84
CMTM1-210ENST00000528441 AGAP1Q9UPQ3 857 aa9.81□□□□□ -0.84
CMTM1-210ENST00000528441 C2CD2Q9Y426 696 aa9.81□□□□□ -0.84
CMTM1-210ENST00000528441 MYO10Q9HD67 2058 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 OR6C75A6NL08 312 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 PPEF2O14830 753 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 KIAA0391O15091 583 aaKnown RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 EIF3DO15371 548 aaKnown RBP eCLIP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 HUS1O60921 280 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 PHACTR2O75167 634 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 EFEMP2O95967 443 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 C1RP00736 705 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 DLATP10515 647 aaKnown RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 PTPN2P17706 415 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 TNNI1P19237 187 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 HOXA9P31269 272 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 PNPLA4P41247 253 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 CDR1P51861 262 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 EPHB3P54753 998 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 TSPY1Q01534 308 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 CUL4BQ13620 913 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 SURF1Q15526 300 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 E2F4Q16254 413 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 TPGS2Q68CL5 300 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 LILRA6Q6PI73 481 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 RSPO2Q6UXX9 243 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 MTSS1LQ765P7 747 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 NT5DC4Q86YG4 428 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 CSGALNACT2Q8N6G5 542 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 LEO1Q8WVC0 666 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 ZNF707Q96C28 371 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 MCRS1Q96EZ8 462 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 C7orf25Q9BPX7 421 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 OXCT2Q9BYC2 517 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 KCNK12Q9HB15 430 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 C11orf16Q9NQ32 467 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 ASAH2Q9NR71 780 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 KBTBD4Q9NVX7 518 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 HCFC1R1Q9NWW0 138 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 HSPBP1Q9NZL4 362 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 AFF4Q9UHB7 1163 aaKnown RBP9.8□□□□□ -0.84
CMTM1-210ENST00000528441 CA14Q9ULX7 337 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 INSL5Q9Y5Q6 135 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 UBE4BO95155 1302 aa9.8□□□□□ -0.84
CMTM1-210ENST00000528441 ANK1P16157 1881 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 FRMD3A2A2Y4 597 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 ZNF197O14709 1029 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 MEFVO15553 781 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-210ENST00000528441 EXOC3O60645 756 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 KIF20AO95235 890 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 RHOP08100 348 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 LAMP2P13473 410 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 ATF2P15336 505 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 TYMPP19971 482 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 PAX3P23760 479 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 LILRA4P59901 499 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 NUCB2P80303 420 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 MYL7Q01449 175 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 MYO1EQ12965 1108 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 TRPC3Q13507 836 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 SLC39A12Q504Y0 691 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 SLC8B1Q6J4K2 584 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 CNNM4Q6P4Q7 775 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 CD300LGQ6UXG3 332 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
CMTM1-210ENST00000528441 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 RSAD2Q8WXG1 361 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 CCDC127Q96BQ5 260 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 CHAMP1Q96JM3 812 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 MMS19Q96T76 1030 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 MTMR12Q9C0I1 747 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 KIAA1586Q9HCI6 787 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 ABI2Q9NYB9 513 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-210ENST00000528441 USP25Q9UHP3 1055 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 RCOR1Q9UKL0 485 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 CDH7Q9ULB5 785 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 DUSP12Q9UNI6 340 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 YIPF1Q9Y548 306 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 SNX9Q9Y5X1 595 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 NUMBLQ9Y6R0 609 aa9.79□□□□□ -0.84
CMTM1-210ENST00000528441 KPNA7A9QM74 516 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 M0QZQ0 153 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 NARSO43776 548 aaKnown RBP9.78□□□□□ -0.84
CMTM1-210ENST00000528441 FAM189A1O60320 539 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 ADSSP30520 456 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 RBP5P82980 135 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 FOXK1P85037 733 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 DUSP4Q13115 394 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms