RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DCDC2CA8MYV0 355 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 TP73O15350 636 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 HBP1O60381 514 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 B4GALT4O60513 344 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 TMEM191BP0C7N4 346 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 OSBPP22059 807 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 IVDP26440 423 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 MARK3P27448 753 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 NF2P35240 595 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 MYL6P60660 151 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 SNX1Q13596 522 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 YTHDF3Q7Z739 585 aaKnown RBP16.29■□□□□ 0.2
USH1C-207ENST00000527720 RBM41Q96IZ5 413 aaKnown RBP16.29■□□□□ 0.2
USH1C-207ENST00000527720 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 MROH8Q9H579 483 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 RBPJLQ9UBG7 517 aa16.29■□□□□ 0.2
USH1C-207ENST00000527720 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
USH1C-207ENST00000527720 TRIM66O15016 1216 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 HOXC6P09630 235 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
USH1C-207ENST00000527720 MMP13P45452 471 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 SEC24CP53992 1094 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 LMNB2Q03252 620 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 TNFAIP8L3Q5GJ75 292 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 RCOR2Q8IZ40 523 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 CCDC89Q8N998 374 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 ANKRD36BP1Q96IX9 119 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 NFKBIZQ9BYH8 718 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 LRRC4CQ9HCJ2 640 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 PPANQ9NQ55 473 aaKnown RBP16.28■□□□□ 0.2
USH1C-207ENST00000527720 NEU2Q9Y3R4 380 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 TCRBV5S1A1TA0A578 114 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 IL18RAPO95256 599 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 TNNC2P02585 160 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 PGK2P07205 417 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 ATF2P15336 505 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 FGFR4P22455 802 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 TMOD1P28289 359 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 COPS2P61201 443 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
USH1C-207ENST00000527720 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 RHPN2Q8IUC4 686 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 ATG4AQ8WYN0 398 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 CEP83Q9Y592 693 aa16.28■□□□□ 0.2
USH1C-207ENST00000527720 RASGRF2O14827 1237 aa16.27■□□□□ 0.2
USH1C-207ENST00000527720 ZNF699Q32M78 642 aa16.27■□□□□ 0.2
USH1C-207ENST00000527720 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
USH1C-207ENST00000527720 CCDC114Q96M63 670 aa16.27■□□□□ 0.2
USH1C-207ENST00000527720 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.2
USH1C-207ENST00000527720 AAASQ9NRG9 546 aa16.27■□□□□ 0.2
USH1C-207ENST00000527720 PTPN7P35236 360 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 TTLL4Q14679 1199 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 LLGL1Q15334 1064 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 DNAJC24Q6P3W2 148 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 DRICH1Q6PGQ1 229 aaPredicted RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 CEP128Q6ZU80 1094 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 SHCBP1Q8NEM2 672 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 CCHCR1Q8TD31 782 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 RAPGEF5Q92565 580 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 CLMNQ96JQ2 1002 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 XYLT2Q9H1B5 865 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 STRIP2Q9ULQ0 834 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 R3HDM2Q9Y2K5 976 aaKnown RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 TLDC2A0PJX2 215 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 ASB14A6NK59 587 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 O00370 1275 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 CD58P19256 250 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 SSTR3P32745 418 aaPredicted RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 ASPAP45381 313 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 ITGA8P53708 1063 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
USH1C-207ENST00000527720 MOGSQ13724 837 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 Q3C1V9 767 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 PPP1R15BQ5SWA1 713 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 ERMARDQ5T6L9 678 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 ZNF365Q70YC5 407 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 TAOK1Q7L7X3 1001 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 CCDC25Q86WR0 208 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 HEMGNQ9BXL5 484 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 FOXP3Q9BZS1 431 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 R3HDMLQ9H3Y0 253 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 ANAPC5Q9UJX4 755 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
USH1C-207ENST00000527720 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms