RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 POLR2BP30876 1174 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 CXCL17Q6UXB2 119 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 UBL4BQ8N7F7 174 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 HPDLQ96IR7 371 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 VCPIP1Q96JH7 1222 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 EIF2AQ9BY44 585 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 BCO2Q9BYV7 579 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 RBM12Q9NTZ6 932 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 SNTG2Q9NY99 539 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 PGRMC1O00264 195 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 NOMO3P69849 1222 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 TMEM40Q8WWA1 233 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 ADAM22Q9P0K1 906 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 ANK1P16157 1881 aa17.26■□□□□ 0.35
SNRNP35-204ENST00000527158 M0QZ92 97 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 LSM8O95777 96 aaKnown RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CFHP08603 1231 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 GLE1Q53GS7 698 aaKnown RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 MON1BQ7L1V2 547 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 PHF13Q86YI8 300 aaPredicted RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 XPNPEP3Q9NQH7 507 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 DDX3YO15523 660 aaKnown RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CAPN2P17655 700 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 COMTP21964 271 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 RRM1P23921 792 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 SSTR3P32745 418 aaPredicted RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 NKX3-2P78367 333 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 TRIM32Q13049 653 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 RASGEF1CQ8N431 466 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 TMEM35BQ8NCS4 154 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 SNX27Q96L92 541 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 LRRC1Q9BTT6 524 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 WNT8AQ9H1J5 351 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CARD9Q9H257 536 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 GTF2IRD1Q9UHL9 959 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 CEP83Q9Y592 693 aa17.25■□□□□ 0.35
SNRNP35-204ENST00000527158 A0A0U1RQG5 324 aaPredicted RBP17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 MED7O43513 233 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 BRD2P25440 801 aaKnown RBP17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 HOXD10P28358 340 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 TNNT3P45378 269 aaPredicted RBP17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 TNNC1P63316 161 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 CLUL1Q15846 466 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 C8orf74Q6P047 294 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 C11orf70Q9BRQ4 267 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 ZNF518BQ9C0D4 1074 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 ANAPC7Q9UJX3 599 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 HPCAL4Q9UM19 191 aa17.24■□□□□ 0.35
SNRNP35-204ENST00000527158 SPOPO43791 374 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 STAU1O95793 577 aaKnown RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 PAEPP09466 180 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 CDH8P55286 799 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 FAM47CQ5HY64 1035 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 PCDHGC3Q9UN70 934 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 NOC2LQ9Y3T9 749 aaKnown RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 HES2Q9Y543 173 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 CD19P15391 556 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 SLC20A2Q08357 652 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 TTC39CQ8N584 583 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 BEST2Q8NFU1 509 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 BTBD6Q96KE9 485 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 NAP1L3Q99457 506 aaPredicted RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 SMYD3Q9H7B4 428 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 TTC7AQ9ULT0 858 aaPredicted RBP17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 SCINQ9Y6U3 715 aa17.23■□□□□ 0.35
SNRNP35-204ENST00000527158 MYO1FO00160 1098 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 RECQL4O94761 1208 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 MRPS6P82932 125 aaKnown RBP17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 MMS22LQ6ZRQ5 1243 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 ZSWIM1Q9BR11 485 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 TMEM59LQ9UK28 342 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 KRIT1O00522 736 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 RPLP2P05387 115 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms