RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ODC1P11926 461 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 AARSP49588 968 aaKnown RBP eCLIP14.71□□□□□ -0.05
CD44-224ENST00000526669 CDH8P55286 799 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 NR1I3Q14994 352 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 UVSSAQ2YD98 709 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 WSCD1Q658N2 575 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 TRIM65Q6PJ69 517 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 RRAGAQ7L523 313 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 OSTM1Q86WC4 334 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 VPS52Q8N1B4 723 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 PPM1KQ8N3J5 372 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 SPPL3Q8TCT6 385 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 TAF4BQ92750 862 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 ARID3AQ99856 593 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 PLVAPQ9BX97 442 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 TRIM5Q9C035 493 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 SDCBP2Q9H190 292 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 PCDHB8Q9UN66 801 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 SIK3Q9Y2K2 1263 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 PCDHGC5Q9Y5F6 944 aa14.71□□□□□ -0.05
CD44-224ENST00000526669 MYO16Q9Y6X6 1858 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 GOLGA6L3A6NEY3 463 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 C5orf67F2Z3F1 127 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 M0QZQ0 153 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 CBFA2T2O43439 604 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 HUS1O60921 280 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 SOD2P04179 222 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 RB1P06400 928 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 WEE2P0C1S8 567 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 CD58P19256 250 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 DNAJB1P25685 340 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 ASPAP45381 313 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 PLCB3Q01970 1234 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 KRT17Q04695 432 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 ARHGAP44Q17R89 818 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 RTP2Q5QGT7 225 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 PLPP4Q5VZY2 271 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 PHLDB3Q6NSJ2 640 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 PRSS55Q6UWB4 352 aaPredicted RBP14.7□□□□□ -0.06
CD44-224ENST00000526669 DDX53Q86TM3 631 aaKnown RBP14.7□□□□□ -0.06
CD44-224ENST00000526669 ADGRF2Q8IZF7 708 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 PDCL2Q8N4E4 241 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 APPL2Q8NEU8 664 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 POF1BQ8WVV4 589 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 ERGIC2Q96RQ1 377 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 MRPL45Q9BRJ2 306 aaKnown RBP14.7□□□□□ -0.06
CD44-224ENST00000526669 C11orf84Q9BUA3 381 aaPredicted RBP14.7□□□□□ -0.06
CD44-224ENST00000526669 ZNF576Q9H609 170 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 VRTNQ9H8Y1 702 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 FAM207AQ9NSI2 230 aaPredicted RBP14.7□□□□□ -0.06
CD44-224ENST00000526669 GDAP2Q9NXN4 497 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 FHOD1Q9Y613 1164 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 GREB1Q4ZG55 1949 aa14.7□□□□□ -0.06
CD44-224ENST00000526669 CARNS1A5YM72 827 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 H3BNC9 293 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 EPHB6O15197 1021 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 EFEMP2O95967 443 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 P4HA1P13674 534 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 CDR1P51861 262 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 ELAVL2Q12926 359 aaKnown RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 ORC1Q13415 861 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 CUL2Q13617 745 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 SOWAHAQ2M3V2 549 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 USP41Q3LFD5 358 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 VARS2Q5ST30 1063 aaKnown RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 IQCEQ6IPM2 695 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 DPY19L2P1Q6NXN4 242 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 SARM1Q6SZW1 724 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 GPIHBP1Q8IV16 184 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 GLYCTKQ8IVS8 523 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 RNF168Q8IYW5 571 aaPredicted RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 TOP6BLQ8N6T0 577 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 NEK11Q8NG66 645 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 KBTBD7Q8WVZ9 684 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 RIN2Q8WYP3 895 aaPredicted RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 KREMEN1Q96MU8 473 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 FAM161BQ96MY7 647 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 TTPALQ9BTX7 342 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 ZBP1Q9H171 429 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 GANQ9H2C0 597 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 TTYH1Q9H313 450 aaPredicted RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
CD44-224ENST00000526669 ENTPD7Q9NQZ7 604 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 APEX2Q9UBZ4 518 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 BRWD1Q9NSI6 2320 aa14.69□□□□□ -0.06
CD44-224ENST00000526669 SYN3O14994 580 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 URODP06132 367 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 TPM3P06753 285 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 RPL17P18621 184 aaKnown RBP14.68□□□□□ -0.06
CD44-224ENST00000526669 FGFR3P22607 806 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 ACAT1P24752 427 aaKnown RBP14.68□□□□□ -0.06
CD44-224ENST00000526669 IRS1P35568 1242 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 GLUD2P49448 558 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 ZNF75DP51815 510 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 ERVFC1P60507 584 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 RAPGEF1Q13905 1077 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 KLHDC7AQ5VTJ3 777 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms