RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ADGRA2Q96PE1 1338 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 WDR91A4D1P6 747 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 E9PLN8 166 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 TLE1Q04724 770 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 ITIH3Q06033 890 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 RAB39AQ14964 217 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 SEMA6DQ8NFY4 1073 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 POC1BQ8TC44 478 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 VKORC1Q9BQB6 163 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 CALCOCO1Q9P1Z2 691 aa5.54□□□□□ -1.52
CSDE1-210ENST00000525878 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-210ENST00000525878 SPATA31A3Q5VYP0 1347 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 TOR1BO14657 336 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 HTRA2O43464 458 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-210ENST00000525878 ANXA1P04083 346 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 CD1AP06126 327 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 EDNRBP24530 442 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 PIGFQ07326 219 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 C1orf162Q8NEQ5 155 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-210ENST00000525878 RFKQ969G6 155 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 PBKQ96KB5 322 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 HAPLN3Q96S86 360 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 IMPG2Q9BZV3 1241 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 ST3GAL5Q9UNP4 418 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 LIMCH1Q9UPQ0 1083 aa5.53□□□□□ -1.52
CSDE1-210ENST00000525878 TMA7Q9Y2S6 64 aaKnown RBP5.53□□□□□ -1.52
CSDE1-210ENST00000525878 LINC01548A6NM66 108 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 C5AR1P21730 350 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 LPOP22079 712 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-210ENST00000525878 EXOSC10Q01780 885 aaKnown RBP5.52□□□□□ -1.53
CSDE1-210ENST00000525878 PREPLQ4J6C6 727 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-210ENST00000525878 TAPT1Q6NXT6 567 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 RASAL3Q86YV0 1011 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 SLC17A8Q8NDX2 589 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHB1Q9Y5F3 818 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 KAT6AQ92794 2004 aa5.52□□□□□ -1.53
CSDE1-210ENST00000525878 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-210ENST00000525878 LATS1O95835 1130 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 CNGA1P29973 690 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 NPTX2P47972 431 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 IL10RAQ13651 578 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 LLGL1Q15334 1064 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 PDSS2Q86YH6 399 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 FAM9AQ8IZU1 332 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-210ENST00000525878 CNTD1Q8N815 330 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 B3GALNT2Q8NCR0 500 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 TRIB1Q96RU8 372 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 OSBPL9Q96SU4 736 aa5.51□□□□□ -1.53
CSDE1-210ENST00000525878 PUS7LQ9H0K6 701 aaKnown RBP5.51□□□□□ -1.53
CSDE1-210ENST00000525878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSDE1-210ENST00000525878 ZNF804BA4D1E1 1349 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA12O60330 932 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 SLC16A1P53985 500 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 SLC10A2Q12908 348 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 EIF2B5Q13144 721 aaKnown RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 MAPK7Q13164 816 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 CLUL1Q15846 466 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 EZH2Q15910 746 aaKnown RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 CLPTM1LQ96KA5 538 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 ALG8Q9BVK2 526 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 SIDT1Q9NXL6 827 aaKnown RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 ETAA1Q9NY74 926 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 SERGEFQ9UGK8 458 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
CSDE1-210ENST00000525878 A0A0B4J269 797 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 CCDC154A6NI56 674 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 RHOP08100 348 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 DRD4P21917 467 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 PCSK6P29122 969 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 IARSP41252 1262 aaKnown RBP5.49□□□□□ -1.53
CSDE1-210ENST00000525878 TUBB3Q13509 450 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 SRSF7Q16629 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSDE1-210ENST00000525878 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 C11orf87Q6NUJ2 197 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 PGM2L1Q6PCE3 622 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 ZNF782Q6ZMW2 699 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-210ENST00000525878 AOPEPQ8N6M6 819 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 ZNF366Q8N895 744 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 VGLL2Q8N8G2 317 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 SCAMP4Q969E2 229 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 COA7Q96BR5 231 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 SMOQ99835 787 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 AMBRA1Q9C0C7 1298 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 PADI4Q9UM07 663 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 PRKAB1Q9Y478 270 aa5.49□□□□□ -1.53
CSDE1-210ENST00000525878 PRSS29PA6NIE9 313 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 NT5C1B-RDH14C9J2C7 533 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 F2RL2O00254 374 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 TTLL1O95922 423 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 KRT85P78386 507 aa5.48□□□□□ -1.53
CSDE1-210ENST00000525878 TCF15Q12870 199 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms