RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ARNTLO00327 626 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 LAD1O00515 517 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 TOM1L1O75674 476 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 VNN2O95498 520 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 BMP15O95972 392 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 OR4Q2P0C623 313 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CXCL8P10145 99 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CXCL12P48061 93 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 TOB1P50616 345 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 YWHAHQ04917 246 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 STRN3Q13033 797 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 GAS6Q14393 721 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 IL17AQ16552 155 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 KRT79Q5XKE5 535 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 LAIR1Q6GTX8 287 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 KCNK18Q7Z418 384 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 TMC8Q8IU68 726 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 YAF2Q8IY57 180 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CELF5Q8N6W0 485 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CSGALNACT1Q8TDX6 532 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 RSPRY1Q96DX4 576 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 NTPCRQ9BSD7 190 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 GPR88Q9GZN0 384 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CRISPLD1Q9H336 500 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 RBM12Q9NTZ6 932 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 CIZ1Q9ULV3 898 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 PCDHB6Q9Y5E3 794 aa10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 HELZP42694 1942 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-206ENST00000525303 SLC38A8A6NNN8 435 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 CHURC1-FNTBB4DL54 471 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 M0QZQ0 153 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 CHADO15335 359 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 CLDN3O15551 220 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 KRT37O76014 449 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 OAZ2O95190 189 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 RETP07949 1114 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 MAPTP10636 758 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 GUCY2CP25092 1073 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 MATR3P43243 847 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 SOX9P48436 509 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 FNTBP49356 437 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 SMTNP53814 917 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 EPHB3P54753 998 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 DMWDQ09019 674 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 FCHO2Q0JRZ9 810 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 DUSP4Q13115 394 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 PLD1Q13393 1074 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 SIM2Q14190 667 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 LRRC32Q14392 662 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 ZRSR1Q15695 479 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 STXBP5Q5T5C0 1151 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 SPEM1Q8N4L4 309 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 TMEM161BQ8NDZ6 487 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 SPIRE2Q8WWL2 714 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 E2F7Q96AV8 911 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 KIF12Q96FN5 646 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 ZNF396Q96N95 335 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 IPO9Q96P70 1041 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 MMTAG2Q9BU76 263 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 LRRC3Q9BY71 257 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 HAPLN2Q9GZV7 340 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 DNAJC25Q9H1X3 360 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 THADAQ6YHU6 1953 aa10.41□□□□□ -0.74
TRAPPC4-206ENST00000525303 USP24Q9UPU5 2620 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 TTC26A0AVF1 554 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 LRP3O75074 770 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 F13A1P00488 732 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 PLS3P13797 630 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 LRPAP1P30533 357 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 TNFSF9P41273 254 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 ALDH1A3P47895 512 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 GUCY2FP51841 1108 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 KPNA1P52294 538 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 MLLT6P55198 1093 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 PPP2R3AQ06190 1150 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 MCL1Q07820 350 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 RESTQ13127 1097 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 SRSF5Q13243 272 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 GPR17Q13304 367 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 WDR44Q5JSH3 913 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 HEATR6Q6AI08 1181 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 TXNDC11Q6PKC3 985 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 ZPBP2Q6X784 338 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 DSTYKQ6XUX3 929 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 DTHD1Q6ZMT9 781 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 Q6ZS52 159 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 USP37Q86T82 979 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 ARID3BQ8IVW6 561 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 TTC8Q8TAM2 541 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 NETO1Q8TDF5 533 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 MSANTD3Q96H12 275 aa10.4□□□□□ -0.74
TRAPPC4-206ENST00000525303 ZFYVE19Q96K21 471 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms