RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TMEM209Q96SK2 561 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 SERTAD1Q9UHV2 236 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 MRPS23Q9Y3D9 190 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 NUMBLQ9Y6R0 609 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 CYB561D2O14569 222 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 SRFP11831 508 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 AFMP43652 599 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 TFAMQ00059 246 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 TWF1Q12792 350 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 GPR17Q13304 367 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 CUL4BQ13620 913 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 SV2CQ496J9 727 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 PRSS36Q5K4E3 855 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 PARM1Q6UWI2 310 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 MTSS1LQ765P7 747 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 ST13P5Q8NFI4 369 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 CACTINQ8WUQ7 758 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 FAM84AQ96KN4 292 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZNF560Q96MR9 790 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 CORO1BQ9BR76 489 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 FBXL21Q9UKT6 434 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 DSEQ9UL01 958 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 YIPF1Q9Y548 306 aa12.06□□□□□ -0.48
TRAPPC4-204ENST00000524797 PVALEFA0A1B0GWK0 134 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CFHP08603 1231 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 PFKFB1P16118 471 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CEBPBP17676 345 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CMA1P23946 247 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 POLR2BP30876 1174 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 KRT85P78386 507 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 C1orf127Q8N9H9 656 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 OR10T2Q8NGX3 314 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 SCFD1Q8WVM8 642 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 FGF14Q92915 247 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 RTP3Q9BQQ7 232 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 RPP25Q9BUL9 199 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CRISPLD1Q9H336 500 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 PDE11AQ9HCR9 933 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CEP72Q9P209 647 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 AGAP1Q9UPQ3 857 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 MTMR11A4FU01 709 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 TGFB1I1O43294 461 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 ITGB3P05106 788 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 NPR3P17342 541 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 PLD1Q13393 1074 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 BMT2Q1RMZ1 405 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CWF19L1Q69YN2 538 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 POTEHQ6S545 545 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 NELFCDQ8IXH7 590 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 TMEM105Q8N8V8 129 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 NUP210Q8TEM1 1887 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 TCEAL4Q96EI5 215 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 MCRS1Q96EZ8 462 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 PAGE5Q96GU1 130 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 MFSD1Q9H3U5 465 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC2A4RGQ9NR83 387 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 WNT16Q9UBV4 365 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 MIA3Q5JRA6 1907 aa12.05□□□□□ -0.48
TRAPPC4-204ENST00000524797 A0A1B0GVL5 298 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZNF233A6NK53 670 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 KPNA7A9QM74 516 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 KLRC4O43908 158 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 PNPLA4P41247 253 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 BFSP1Q12934 665 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 DUSP4Q13115 394 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 WSCD1Q658N2 575 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 SCARA3Q6AZY7 606 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 CENPPQ6IPU0 288 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 CBWD2Q8IUF1 395 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 SIX5Q8N196 739 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 THEM5Q8N1Q8 247 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZNF512Q96ME7 567 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 PRRX2Q99811 253 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 KXD1Q9BQD3 176 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC39A2Q9NP94 309 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 AGPAT3Q9NRZ7 376 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 SIX4Q9UIU6 781 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
TRAPPC4-204ENST00000524797 TRIOO75962 3097 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms