RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 UBLCP1Q8WVY7 318 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CLEC4DQ8WXI8 215 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ARHGEF26Q96DR7 871 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 FAM20AQ96MK3 541 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 FMO2Q99518 471 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 MPHOSPH6Q99547 160 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CDX2Q99626 313 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SEZ6LQ9BYH1 1024 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 STK33Q9BYT3 514 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CELF4Q9BZC1 486 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 TRPV6Q9H1D0 765 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 CD248Q9HCU0 757 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 ERVK-5Q9HDB9 667 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 PPANQ9NQ55 473 aaKnown RBP8.37□□□□□ -1.07
SPIDR-223ENST00000524033 SLC12A4Q9UP95 1085 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 NR2E1Q9Y466 385 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
SPIDR-223ENST00000524033 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CCT8L1PA6NM43 557 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 RSPH10B2B2RC85 870 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 H0YHG0 523 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 PHF2O75151 1096 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CAND2O75155 1236 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 GGPS1O95749 300 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CD4P01730 458 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CYP3A4P08684 503 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 RSPH10BP0C881 870 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CSF2RAP15509 400 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CTNNA2P26232 953 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CYP2C18P33260 490 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CPT1AP50416 773 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ALDH5A1P51649 535 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ZNF131P52739 623 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 RPS6P62753 249 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 SETQ01105 290 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 MAPK7Q13164 816 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 PPIGQ13427 754 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■■□□□ 13.2
SPIDR-223ENST00000524033 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 USH1GQ495M9 461 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 TRIM50Q86XT4 487 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 JAMLQ86YT9 394 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 FMNL3Q8IVF7 1028 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 FAM126BQ8IXS8 530 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ERMNQ8TAM6 284 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 LMO3Q8TAP4 145 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ALG3Q92685 438 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 HVCN1Q96D96 273 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 CHMP6Q96FZ7 201 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 JPH2Q9BR39 696 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 STRA6Q9BX79 667 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 DPH5Q9H2P9 285 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 HAUS2Q9NVX0 235 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 PCYOX1Q9UHG3 505 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
SPIDR-223ENST00000524033 UTP11Q9Y3A2 253 aaKnown RBP8.36□□□□□ -1.07
SPIDR-223ENST00000524033 WDR81Q562E7 1941 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 AGTP01019 485 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 FGGP02679 453 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SHBGP04278 402 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 ACRP10323 421 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 MUTP22033 750 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 GBP1P32455 592 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 FMO5P49326 533 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 USP4Q13107 963 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 RIPK1Q13546 671 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 CTTNQ14247 550 aaKnown RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 NEDD9Q14511 834 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 DRAP1Q14919 205 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SNCBQ16143 134 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 BRDTQ58F21 947 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 DCAF17Q5H9S7 520 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 INTS6LQ5JSJ4 861 aaKnown RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 USP17L6PQ6QN14 398 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SLC30A10Q6XR72 485 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 ZNF365Q70YC5 407 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 CROCCP2Q86T23 111 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 FAM186BQ8IYM0 893 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-223ENST00000524033 CCDC197Q8NCU1 140 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 DNERQ8NFT8 737 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 SLC35G2Q8TBE7 412 aa8.35□□□□□ -1.07
SPIDR-223ENST00000524033 NEK9Q8TD19 979 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms