RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 SEPT2Q15019 361 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 SF3A2Q15428 464 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 CDC37Q16543 378 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PTGISQ16647 500 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 CCDC92Q53HC0 331 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 FAM83BQ5T0W9 1011 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 IL31Q6EBC2 164 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 KIAA1211LQ6NV74 962 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PDXDC1Q6P996 788 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 DZIP1Q86YF9 867 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 FBXO16Q8IX29 292 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 TEX11Q8IYF3 940 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 LILRB2Q8N423 598 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MFSD4AQ8N468 514 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PJA1Q8NG27 643 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 TTC8Q8TAM2 541 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 P2RX5Q93086 422 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 NSUN4Q96CB9 384 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 SUCLG2Q96I99 432 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MTG1Q9BT17 334 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MKRN2Q9H000 416 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 AP5M1Q9H0R1 490 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 DHX36Q9H2U1 1008 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 CLMPQ9H6B4 373 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 TLE6Q9H808 572 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 KCNK12Q9HB15 430 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 ST7Q9NRC1 585 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 WNT16Q9UBV4 365 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 GMEB2Q9UKD1 530 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 KLK13Q9UKR3 277 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 FBXL21Q9UKT6 434 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 CA14Q9ULX7 337 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PCDHB10Q9UN67 800 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 Q9Y3F1 56 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 ADGRA3Q8IWK6 1321 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 FANCIQ9NVI1 1328 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 ANKRD34BA5PLL1 514 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 PRR19A6NJB7 356 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 PDPK1O15530 556 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 IFIT1P09914 478 aaKnown RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 SHMT1P34896 483 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 OXCT1P55809 520 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 MORC3Q14149 939 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 TOMM20Q15388 145 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 SLC4A10Q6U841 1118 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 C16orf86Q6ZW13 317 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 TDRD5Q8NAT2 981 aaKnown RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 TGFBRAP1Q8WUH2 860 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 ATRIPQ8WXE1 791 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 RSAD2Q8WXG1 361 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 IFIH1Q9BYX4 1025 aaKnown RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 LUZP4Q9P127 313 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 ABCF2Q9UG63 623 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 SAP30BPQ9UHR5 308 aaKnown RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 EVLQ9UI08 416 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 ISY1Q9ULR0 285 aaKnown RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 MTF2Q9Y483 593 aaPredicted RBP5.86□□□□□ -1.47
PABPC1-223ENST00000523636 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 PCNX1Q96RV3 2341 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 AHCTF1Q8WYP5 2266 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 F5P12259 2224 aa5.86□□□□□ -1.47
PABPC1-223ENST00000523636 FNDC1Q4ZHG4 1894 aaPredicted RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 TLN1Q9Y490 2541 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 B2RBV5 119 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 SHOXO15266 292 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 CYP26A1O43174 497 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 N4BP1O75113 896 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 CBX7O95931 251 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 NTRK1P04629 796 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 CEACAM5P06731 702 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 MMP3P08254 477 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 FOSL1P15407 271 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 CD247P20963 164 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 ADORA1P30542 326 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 BEND3Q5T5X7 828 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 STPG1Q5TH74 334 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 TDRD10Q5VZ19 366 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 HEATR6Q6AI08 1181 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 MRM1Q6IN84 353 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 SESTD1Q86VW0 696 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 ANKRD44Q8N8A2 993 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 KIAA1958Q8N8K9 716 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 LPIN2Q92539 896 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 KAT2BQ92831 832 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 DDX11Q96FC9 970 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 Q96M66 194 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms