RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ASPAP45381 313 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 KRT17Q04695 432 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 SOWAHAQ2M3V2 549 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 FAM171A1Q5VUB5 890 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 SCARA5Q6ZMJ2 495 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 DDX53Q86TM3 631 aaKnown RBP25.89■■□□□ 1.74
PVT1-212ENST00000521951 RNF168Q8IYW5 571 aaPredicted RBP25.89■■□□□ 1.74
PVT1-212ENST00000521951 TOP6BLQ8N6T0 577 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 BCO2Q9BYV7 579 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 SMYD3Q9H7B4 428 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 UBE2TQ9NPD8 197 aaPredicted RBP25.89■■□□□ 1.74
PVT1-212ENST00000521951 PCDHB8Q9UN66 801 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 L1RE1Q9UN81 338 aa25.89■■□□□ 1.74
PVT1-212ENST00000521951 CUL2Q13617 745 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 DPH6Q7L8W6 267 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 APPL2Q8NEU8 664 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 NEK11Q8NG66 645 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 KAT5Q92993 513 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 SDCBP2Q9H190 292 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 GANQ9H2C0 597 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 TIMM13Q9Y5L4 95 aaPredicted RBP25.88■■□□□ 1.73
PVT1-212ENST00000521951 EPHB6O15197 1021 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 WEE2P0C1S8 567 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 ODC1P11926 461 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 TKTP29401 623 aaKnown RBP25.88■■□□□ 1.73
PVT1-212ENST00000521951 CDH8P55286 799 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 GCNT1Q02742 428 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 WSCD1Q658N2 575 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 PDCL2Q8N4E4 241 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 MRFAP1L1Q96HT8 127 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 KREMEN1Q96MU8 473 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 ARID3AQ99856 593 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 CERS4Q9HA82 394 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 DNAJC12Q9UKB3 198 aa25.88■■□□□ 1.73
PVT1-212ENST00000521951 ARHGEF37A1IGU5 675 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 SYN3O14994 580 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 CYP11A1P05108 521 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 UCHL3P15374 230 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 TYMPP19971 482 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 FGFR3P22607 806 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 TBXAS1P24557 533 aaPredicted RBP25.87■■□□□ 1.73
PVT1-212ENST00000521951 RAP1GAPP47736 663 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 MRE11P49959 708 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.87■■□□□ 1.73
PVT1-212ENST00000521951 VSTM4Q8IW00 320 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 FBXO22Q8NEZ5 403 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 B3GALT6Q96L58 329 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 C11orf84Q9BUA3 381 aaPredicted RBP25.87■■□□□ 1.73
PVT1-212ENST00000521951 CYP3A43Q9HB55 503 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 ALG13Q9NP73 1137 aaKnown RBP25.87■■□□□ 1.73
PVT1-212ENST00000521951 AJAP1Q9UKB5 411 aaPredicted RBP25.87■■□□□ 1.73
PVT1-212ENST00000521951 FHOD1Q9Y613 1164 aa25.87■■□□□ 1.73
PVT1-212ENST00000521951 ADCY5O95622 1261 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 SOD2P04179 222 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 USP41Q3LFD5 358 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 IQCEQ6IPM2 695 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 CEP57Q86XR8 500 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 TMEM86AQ8N2M4 240 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 SPPL3Q8TCT6 385 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 KBTBD7Q8WVZ9 684 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 MRPL45Q9BRJ2 306 aaKnown RBP25.86■■□□□ 1.73
PVT1-212ENST00000521951 HERC2P3Q9BVR0 1158 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 NAA15Q9BXJ9 866 aaKnown RBP25.86■■□□□ 1.73
PVT1-212ENST00000521951 DSEQ9UL01 958 aa25.86■■□□□ 1.73
PVT1-212ENST00000521951 CHD9Q3L8U1 2897 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 LAMA3Q16787 3333 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 TSC2P49815 1807 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 TACC1O75410 805 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 FAM163BP0C2L3 166 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 MFAP3P55082 362 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 POLR2FP61218 127 aaKnown RBP25.85■■□□□ 1.73
PVT1-212ENST00000521951 ADGRF2Q8IZF7 708 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 VPS52Q8N1B4 723 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 FAM81BQ96LP2 452 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 TTPALQ9BTX7 342 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 CHST7Q9NS84 486 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 PUF60Q9UHX1 559 aaKnown RBP25.85■■□□□ 1.73
PVT1-212ENST00000521951 FBXL5Q9UKA1 691 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 LZTS1Q9Y250 596 aa25.85■■□□□ 1.73
PVT1-212ENST00000521951 ARHGAP44Q17R89 818 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 RTP2Q5QGT7 225 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 ENOSF1Q7L5Y1 443 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 OSTM1Q86WC4 334 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 METTL23Q86XA0 190 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 ARNTL2Q8WYA1 636 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 STK39Q9UEW8 545 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 ITIH6Q6UXX5 1313 aa25.84■■□□□ 1.73
PVT1-212ENST00000521951 H3BNC9 293 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 CD58P19256 250 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 TRIM21P19474 475 aaKnown RBP25.83■■□□□ 1.73
PVT1-212ENST00000521951 RFX1P22670 979 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 WARSP23381 471 aaKnown RBP25.83■■□□□ 1.73
PVT1-212ENST00000521951 GPM6BQ13491 265 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 SPECC1LQ69YQ0 1117 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 OVOS1Q6IE37 1185 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 UBR7Q8N806 425 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 NUP58Q9BVL2 599 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 NLRC4Q9NPP4 1024 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 CISHQ9NSE2 258 aa25.83■■□□□ 1.73
PVT1-212ENST00000521951 DAAM1Q9Y4D1 1078 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms